AT5G14320


Description : Ribosomal protein S13/S18 family


Gene families : OG_01_0006744 (Gene family) Phylogenetic Tree(s): OG0006744_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): AT5G14320
Cluster HCCA cluster: Cluster_140

Target Alias Description ECC score Gene Family Method Actions
Cre12.g493950 No alias 29.2.1.1.1.1.13 protein.synthesis.ribosomal... 0.22 Gene family
GSVIVT01008933001 No alias 29.2.1.1.1.1.13 protein.synthesis.ribosomal... 0.18 Gene family
LOC_Os03g49710 Os03g0704000 29.2.1.1.1.1.13 protein.synthesis.ribosomal... 0.17 Gene family
MA_10431241g0010 No alias 29.2.1.1.1.1.13 protein.synthesis.ribosomal... 0.04 Gene family
Solyc05g005873.1.1 Solyc05g005873.1 29.2.1.1.1.1.13 protein.synthesis.ribosomal... 0.15 Gene family
Zm00001d033665 GRMZM2G153476 29.2.1.1.1.1.13 protein.synthesis.ribosomal... 0.22 Gene family

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome ISS Arabidopsis.org
BP GO:0006354 DNA-templated transcription, elongation RCA Arabidopsis.org
BP GO:0006412 translation ISS Arabidopsis.org
CC GO:0009507 chloroplast IDA Arabidopsis.org
CC GO:0009507 chloroplast ISM Arabidopsis.org
CC GO:0009570 chloroplast stroma IDA Arabidopsis.org
BP GO:0009773 photosynthetic electron transport in photosystem I RCA Arabidopsis.org
CC GO:0009941 chloroplast envelope IDA Arabidopsis.org
CC GO:0015935 small ribosomal subunit ISS Arabidopsis.org
BP GO:0019288 isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway RCA Arabidopsis.org
BP GO:0019684 photosynthesis, light reaction RCA Arabidopsis.org
BP GO:0035304 regulation of protein dephosphorylation RCA Arabidopsis.org
BP GO:0042254 ribosome biogenesis IBA Arabidopsis.org
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001892 Ribosomal_S13 49 153
No external refs found!