AT1G24560


Description : unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G49055.1); Has 71940 Blast hits to 38124 proteins in 2481 species: Archae - 1358; Bacteria - 12126; Metazoa - 32861; Fungi - 6786; Plants - 4024; Viruses - 195; Other Eukaryotes - 14590 (source: NCBI BLink).


Gene families : OG_01_0004107 (Archaeplastida) Phylogenetic Tree(s): OG_01_0004107_tree ,
OG_02_0003162 (LandPlants) Phylogenetic Tree(s): OG_02_0003162_tree ,
OG_03_0002935 (SeedPlants) Phylogenetic Tree(s): OG_03_0002935_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G24560
Cluster HCCA: Cluster_247

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00166p00076690 evm_27.TU.AmTr_v1... Vesicle trafficking.regulation of membrane tethering and... 0.02 Archaeplastida
GSVIVT01000568001 No alias Vesicle trafficking.regulation of membrane tethering and... 0.05 Archaeplastida
Solyc05g013780.3.1 No alias plant-specific RAB5 effector (PUF2) 0.05 Archaeplastida
AMTR_s00166p00076690 evm_27.TU.AmTr_v1... Vesicle trafficking.regulation of membrane tethering and... 0.02 LandPlants
GSVIVT01000568001 No alias Vesicle trafficking.regulation of membrane tethering and... 0.05 LandPlants
Pp3c19_17030V3.1 No alias No annotation 0.02 LandPlants
Solyc05g013780.3.1 No alias plant-specific RAB5 effector (PUF2) 0.05 LandPlants
GSVIVT01000568001 No alias Vesicle trafficking.regulation of membrane tethering and... 0.05 SeedPlants
Solyc05g013780.3.1 No alias plant-specific RAB5 effector (PUF2) 0.05 SeedPlants

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005737 cytoplasm ISM Interproscan
BP GO:0006486 protein glycosylation RCA Interproscan
BP GO:0006816 calcium ion transport RCA Interproscan
BP GO:0008150 biological_process ND Interproscan
BP GO:0009630 gravitropism RCA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

No InterPro domains available for this sequence

No external refs found!