AT5G13930 (CHS, TT4, ATCHS)


Aliases : CHS, TT4, ATCHS

Description : Chalcone and stilbene synthase family protein


Gene families : OG_01_0001364 (Gene family) Phylogenetic Tree(s): OG0001364_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): AT5G13930
Cluster HCCA cluster: Cluster_162

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01032968001 No alias 16.8.2.1 secondary... 0.08 Gene family
LOC_Os11g32650 Os11g0530600 16.8.2.1 secondary... 0.02 Gene family
MA_10426264g0020 No alias 16.8.2.1 secondary... 0.07 Gene family
MA_10434819g0010 No alias 16.8.2.1 secondary... 0.02 Gene family
MA_20764g0010 No alias 16.8.2.1 secondary... 0.09 Gene family
MA_5735g0010 No alias 16.8.2.1 secondary... 0.04 Gene family
MA_80631g0010 No alias 16.8.2.1 secondary... 0.02 Gene family
Solyc05g053550.3.1 Solyc05g053550.3 16.8.2.1 secondary... 0.1 Gene family
Zm00001d007403 GRMZM2G151227 16.8.2.1 secondary... 0.03 Gene family

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IPI Arabidopsis.org
CC GO:0005634 nucleus IDA Arabidopsis.org
CC GO:0005737 cytoplasm ISM Arabidopsis.org
CC GO:0005783 endoplasmic reticulum IDA Arabidopsis.org
BP GO:0006979 response to oxidative stress IEP Arabidopsis.org
BP GO:0009411 response to UV RCA Arabidopsis.org
BP GO:0009611 response to wounding IEP Arabidopsis.org
BP GO:0009629 response to gravity IMP Arabidopsis.org
CC GO:0009705 plant-type vacuole membrane IDA Arabidopsis.org
BP GO:0009715 chalcone biosynthetic process IMP Arabidopsis.org
BP GO:0009718 anthocyanin-containing compound biosynthetic process RCA Arabidopsis.org
BP GO:0009733 response to auxin IEP Arabidopsis.org
BP GO:0009744 response to sucrose RCA Arabidopsis.org
BP GO:0009753 response to jasmonic acid IEP Arabidopsis.org
BP GO:0009813 flavonoid biosynthetic process IMP Arabidopsis.org
BP GO:0009813 flavonoid biosynthetic process ISS Arabidopsis.org
BP GO:0009813 flavonoid biosynthetic process RCA Arabidopsis.org
BP GO:0009926 auxin polar transport IMP Arabidopsis.org
BP GO:0010224 response to UV-B IMP Arabidopsis.org
BP GO:0010224 response to UV-B RCA Arabidopsis.org
MF GO:0016210 naringenin-chalcone synthase activity IMP Arabidopsis.org
BP GO:0031540 regulation of anthocyanin biosynthetic process IEP Arabidopsis.org
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001099 Chalcone/stilbene_synthase_N 10 233
IPR012328 Chalcone/stilbene_synth_C 244 394
No external refs found!