AT5G13790 (AGL15)


Aliases : AGL15

Description : AGAMOUS-like 15


Gene families : OG_01_0000006 (Gene family) Phylogenetic Tree(s): OG0000006_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): AT5G13790
Cluster HCCA cluster: Cluster_110

Target Alias Description ECC score Gene Family Method Actions
AT1G77950 AGL67 AGAMOUS-like 67 0.03 Gene family
AT2G45650 AGL6 AGAMOUS-like 6 0.03 Gene family
AT3G58780 AGL1, SHP1 K-box region and MADS-box transcription factor family protein 0.04 Gene family
AT5G23260 AGL32, TT16, ABS K-box region and MADS-box transcription factor family protein 0.03 Gene family
GSVIVT01000175001 No alias 27.3.24 RNA.regulation of transcription.MADS box... 0.05 Gene family
GSVIVT01012250001 No alias 33.99 development.unspecified Floral homeotic gene... 0.02 Gene family
GSVIVT01018450001 No alias 27.3.24 RNA.regulation of transcription.MADS box... 0.03 Gene family
LOC_Os01g10504 Os01g0201700 33.99 development.unspecified Floral homeotic gene... 0.02 Gene family
LOC_Os03g03100 Os03g0122600 27.3.24 RNA.regulation of transcription.MADS box... 0.02 Gene family
LOC_Os03g54170 Os03g0753100 33.99 development.unspecified Encodes a MADS box... 0.03 Gene family
LOC_Os05g11414 Os05g0203800 33.99 development.unspecified Floral homeotic gene... 0.03 Gene family
LOC_Os06g11330 Os06g0217300 33.99 development.unspecified Encodes a nuclear protein... 0.02 Gene family
LOC_Os07g01820 Os07g0108900 33.99 development.unspecified Floral homeotic gene... 0.03 Gene family
LOC_Os07g41370 Os07g0605200 33.99 development.unspecified MADS box gene negatively... 0.03 Gene family
LOC_Os08g38590 Os08g0494100 27.3.24 RNA.regulation of transcription.MADS box... 0.02 Gene family
LOC_Os12g10540 Os12g0207000 33.99 development.unspecified AGAMOUS [AG]-like MADS box... 0.03 Gene family
Smo5960 PACid_15422574 No description available 0.02 Gene family
Solyc03g006830.3.1 Solyc03g006830.3 No description available 0.03 Gene family
Solyc04g078300.3.1 Solyc04g078300.3 27.3.24 RNA.regulation of transcription.MADS box... 0.02 Gene family
Solyc06g064840.3.1 Solyc06g064840.3 27.3.24 RNA.regulation of transcription.MADS box... 0.02 Gene family
Solyc10g080030.2.1 Solyc10g080030.2 27.3.24 RNA.regulation of transcription.MADS box... 0.02 Gene family
Zm00001d013259 GRMZM2G553379 33.99 development.unspecified Floral homeotic gene... 0.02 Gene family
Zm00001d022088 GRMZM2G147716 33.99 development.unspecified Floral homeotic gene... 0.02 Gene family

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IDA Arabidopsis.org
MF GO:0003677 DNA binding IPI Arabidopsis.org
MF GO:0003677 DNA binding ISS Arabidopsis.org
MF GO:0003700 DNA-binding transcription factor activity ISS Arabidopsis.org
MF GO:0005515 protein binding IPI Arabidopsis.org
CC GO:0005634 nucleus IDA Arabidopsis.org
CC GO:0005634 nucleus ISM Arabidopsis.org
CC GO:0005634 nucleus TAS Arabidopsis.org
CC GO:0005634 nucleus NAS Arabidopsis.org
CC GO:0005737 cytoplasm IDA Arabidopsis.org
CC GO:0005737 cytoplasm TAS Arabidopsis.org
BP GO:0009556 microsporogenesis RCA Arabidopsis.org
BP GO:0009793 embryo development ending in seed dormancy IDA Arabidopsis.org
BP GO:0009793 embryo development ending in seed dormancy TAS Arabidopsis.org
BP GO:0009910 negative regulation of flower development IMP Arabidopsis.org
BP GO:0010047 fruit dehiscence IMP Arabidopsis.org
BP GO:0010262 somatic embryogenesis IMP Arabidopsis.org
MF GO:0042803 protein homodimerization activity IDA Arabidopsis.org
BP GO:0045487 gibberellin catabolic process TAS Arabidopsis.org
BP GO:0045892 negative regulation of transcription, DNA-templated IDA Arabidopsis.org
BP GO:0045893 positive regulation of transcription, DNA-templated IDA Arabidopsis.org
BP GO:0045893 positive regulation of transcription, DNA-templated IGI Arabidopsis.org
BP GO:0048481 plant ovule development RCA Arabidopsis.org
BP GO:0048577 negative regulation of short-day photoperiodism, flowering IMP Arabidopsis.org
BP GO:0052543 callose deposition in cell wall RCA Arabidopsis.org
BP GO:0060862 negative regulation of floral organ abscission IMP Arabidopsis.org
BP GO:0060867 fruit abscission IMP Arabidopsis.org
BP GO:0071365 cellular response to auxin stimulus IEP Arabidopsis.org
BP GO:2000692 negative regulation of seed maturation IMP Arabidopsis.org
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002487 TF_Kbox 75 164
IPR002100 TF_MADSbox 10 57
No external refs found!