AT5G13720


Description : Uncharacterised protein family (UPF0114)


Gene families : OG_01_0002497 (Gene family) Phylogenetic Tree(s): OG0002497_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): AT5G13720
Cluster HCCA cluster: Cluster_3

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01032192001 No alias 29.2.1.99.99 protein.synthesis.ribosomal... 0.02 Gene family
LOC_Os07g46330 Os07g0656700 29.2.1.99.99 protein.synthesis.ribosomal... 0.07 Gene family
Solyc01g087680.3.1 Solyc01g087680.3 29.2.1.99.99 protein.synthesis.ribosomal... 0.04 Gene family
Zm00001d007072 GRMZM2G327686 29.2.1.99.99 protein.synthesis.ribosomal... 0.09 Gene family
Zm00001d014744 GRMZM2G179292 35.2 not assigned.unknown Uncharacterised protein family... 0.03 Gene family

Type GO Term Name Evidence Source
CC GO:0009507 chloroplast IDA Arabidopsis.org
CC GO:0009507 chloroplast ISM Arabidopsis.org
CC GO:0009706 chloroplast inner membrane IDA Arabidopsis.org
CC GO:0009941 chloroplast envelope IDA Arabidopsis.org
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR005134 UPF0114 87 225
No external refs found!