AT5G13010 (EMB3011)


Aliases : EMB3011

Description : RNA helicase family protein


Gene families : OG_01_0000259 (Gene family) Phylogenetic Tree(s): OG0000259_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): AT5G13010
Cluster HCCA cluster: Cluster_8

Target Alias Description ECC score Gene Family Method Actions
Cre03.g182950 No alias 27.1.2 RNA.processing.RNA helicase RNA helicase family protein 0.02 Gene family
Cre11.g467654 No alias 27.1.2 RNA.processing.RNA helicase RNA helicase family protein 0.01 Gene family
Cre24.g755347 No alias 27.1.2 RNA.processing.RNA helicase embryo defective 3011... 0.01 Gene family
GSVIVT01028153001 No alias 27.1.2 RNA.processing.RNA helicase RNA helicase family protein 0.02 Gene family
LOC_Os07g32430 Os07g0508000 27.1.2 RNA.processing.RNA helicase embryo defective 3011... 0.03 Gene family
MA_34468g0010 No alias 27.1.2 RNA.processing.RNA helicase RNA helicase family protein 0.02 Gene family
Smo76120 PACid_15413436 No description available 0.03 Gene family
Smo82212 PACid_15409607 27.1.2 RNA.processing.RNA helicase Encodes a homolog of... 0.02 Gene family
Solyc09g008120.3.1 Solyc09g008120.3 27.1.2 RNA.processing.RNA helicase RNA helicase family protein 0.03 Gene family
Solyc10g076910.2.1 Solyc10g076910.2 27.1.2 RNA.processing.RNA helicase embryo defective 3011... 0.04 Gene family
Zm00001d015893 GRMZM2G029258 27.1 RNA.processing ATP-dependent RNA helicase, putative 0.04 Gene family

Type GO Term Name Evidence Source
MF GO:0003724 RNA helicase activity ISS Arabidopsis.org
CC GO:0005634 nucleus ISM Arabidopsis.org
BP GO:0009793 embryo development ending in seed dormancy NAS Arabidopsis.org
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR011545 DEAD/DEAH_box_helicase_dom 564 717
IPR011709 DUF1605 1100 1177
IPR007502 Helicase-assoc_dom 956 1042
IPR001650 Helicase_C 763 892
No external refs found!