AT5G12340


Description : unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G28190.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).


Gene families : OG_01_0004857 (Gene family) Phylogenetic Tree(s): OG0004857_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): AT5G12340
Cluster HCCA cluster: Cluster_34

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01037265001 No alias 35.2 not assigned.unknown unknown protein BEST... 0.05 Gene family
LOC_Os03g24100 Os03g0356526 35.2 not assigned.unknown unknown protein BEST... 0.05 Gene family
Solyc04g057830.1.1 Solyc04g057830.1 35.2 not assigned.unknown unknown protein BEST... 0.04 Gene family
Zm00001d009975 GRMZM2G133095 35.2 not assigned.unknown unknown protein BEST... 0.03 Gene family
Zm00001d038070 GRMZM2G023683 35.2 not assigned.unknown unknown protein BEST... 0.06 Gene family
Zm00001d042063 GRMZM2G057506 35.2 not assigned.unknown unknown protein BEST... 0.06 Gene family
Zm00001d047458 GRMZM2G335604 35.2 not assigned.unknown unknown protein BEST... 0.03 Gene family

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Arabidopsis.org
CC GO:0005739 mitochondrion ISM Arabidopsis.org
BP GO:0008150 biological_process ND Arabidopsis.org
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR025322 DUF4228_plant 38 199
No external refs found!