AT5G12130 (ATTERC, PDE149)


Aliases : ATTERC, PDE149

Description : integral membrane TerC family protein


Gene families : OG_01_0005565 (Gene family) Phylogenetic Tree(s): OG0005565_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): AT5G12130
Cluster HCCA cluster: Cluster_3

Target Alias Description ECC score Gene Family Method Actions
Solyc10g085980.2.1 Solyc10g085980.2 33.99 development.unspecified PIGMENT DEFECTIVE 149 (PDE149) 0.06 Gene family

Type GO Term Name Evidence Source
CC GO:0005886 plasma membrane ISM Arabidopsis.org
CC GO:0009535 chloroplast thylakoid membrane IDA Arabidopsis.org
BP GO:0009902 chloroplast relocation RCA Arabidopsis.org
BP GO:0010027 thylakoid membrane organization IMP Arabidopsis.org
BP GO:0010027 thylakoid membrane organization RCA Arabidopsis.org
CC GO:0016021 integral component of membrane ISS Arabidopsis.org
BP GO:0034660 ncRNA metabolic process RCA Arabidopsis.org
BP GO:0042793 plastid transcription RCA Arabidopsis.org
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR005496 Integral_membrane_TerC 147 350
No external refs found!