AT5G11590 (TINY2)


Aliases : TINY2

Description : Integrase-type DNA-binding superfamily protein


Gene families : OG_01_0000000 (Gene family) Phylogenetic Tree(s): OG0000000_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): AT5G11590
Cluster HCCA cluster: Cluster_168

Target Alias Description ECC score Gene Family Method Actions
AT1G28160 No alias Integrase-type DNA-binding superfamily protein 0.03 Gene family
AT3G23230 No alias Integrase-type DNA-binding superfamily protein 0.03 Gene family
AT3G50260 DEAR1, CEJ1, ATERF#011 cooperatively regulated by ethylene and jasmonate 1 0.03 Gene family
GSVIVT01035911001 No alias No description available 0.02 Gene family
GSVIVT01036388001 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
GSVIVT01036389001 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
LOC_Os02g10760 Os02g0202000 17.5.2 hormone metabolism.ethylene.signal transduction... 0.03 Gene family
LOC_Os02g51670 Os02g0752800 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
LOC_Os02g52670 Os02g0764700 No description available 0.04 Gene family
LOC_Os02g54050 Os02g0781300 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
LOC_Os08g35240 Os08g0454000 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.04 Gene family
LOC_Os08g36920 Os08g0474000 17.5.2 hormone metabolism.ethylene.signal transduction... 0.03 Gene family
MA_166248g0020 No alias No description available 0.04 Gene family
Solyc09g089910.1.1 Solyc09g089910.1 No description available 0.02 Gene family
Solyc09g089930.2.1 Solyc09g089930.2 No description available 0.02 Gene family
Zm00001d016616 GRMZM2G016434 No description available 0.03 Gene family
Zm00001d026184 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
Zm00001d027925 GRMZM2G018984 No description available 0.03 Gene family

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding ISS Arabidopsis.org
MF GO:0003700 DNA-binding transcription factor activity ISS Arabidopsis.org
CC GO:0005634 nucleus ISS Arabidopsis.org
CC GO:0005634 nucleus ISM Arabidopsis.org
BP GO:0006355 regulation of transcription, DNA-templated ISS Arabidopsis.org
MF GO:0043565 sequence-specific DNA binding IDA Arabidopsis.org
BP GO:0045893 positive regulation of transcription, DNA-templated IDA Arabidopsis.org
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 49 99
No external refs found!