AT5G11060 (KNAT4)


Aliases : KNAT4

Description : KNOTTED1-like homeobox gene 4


Gene families : OG_01_0000241 (Gene family) Phylogenetic Tree(s): OG0000241_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): AT5G11060
Cluster HCCA cluster: Cluster_3

Target Alias Description ECC score Gene Family Method Actions
AT1G62360 BUM1, SHL, STM,... KNOX/ELK homeobox transcription factor 0.03 Gene family
GSVIVT01035921001 No alias 27.3.22 RNA.regulation of transcription.HB,Homeobox... 0.03 Gene family
LOC_Os02g08544 Os02g0182800 27.3.22 RNA.regulation of transcription.HB,Homeobox... 0.03 Gene family
LOC_Os06g43860 Os06g0646600 27.3.22 RNA.regulation of transcription.HB,Homeobox... 0.03 Gene family
Smo90744 PACid_15414935 No description available 0.03 Gene family
Solyc05g005090.3.1 Solyc05g005090.3 27.3.22 RNA.regulation of transcription.HB,Homeobox... 0.02 Gene family
Solyc07g007120.3.1 Solyc07g007120.3 27.3.22 RNA.regulation of transcription.HB,Homeobox... 0.04 Gene family
Solyc08g041820.3.1 Solyc08g041820.3 27.3.22 RNA.regulation of transcription.HB,Homeobox... 0.04 Gene family
Zm00001d018742 GRMZM2G028041 27.3.22 RNA.regulation of transcription.HB,Homeobox... 0.03 Gene family
Zm00001d046568 GRMZM2G055243 27.3.22 RNA.regulation of transcription.HB,Homeobox... 0.02 Gene family

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity ISS Arabidopsis.org
CC GO:0005634 nucleus IDA Arabidopsis.org
CC GO:0005634 nucleus ISM Arabidopsis.org
CC GO:0005634 nucleus NAS Arabidopsis.org
CC GO:0005737 cytoplasm NAS Arabidopsis.org
CC GO:0005829 cytosol IDA Arabidopsis.org
BP GO:0009416 response to light stimulus IEP Arabidopsis.org
BP GO:0048513 animal organ development RCA Arabidopsis.org
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR005540 KNOX1 124 164
IPR008422 Homeobox_KN_domain 326 365
IPR005539 ELK_dom 286 307
IPR005541 KNOX2 182 231
No external refs found!