AT5G10970


Description : C2H2 and C2HC zinc fingers superfamily protein


Gene families : OG_01_0000121 (Gene family) Phylogenetic Tree(s): OG0000121_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): AT5G10970
Cluster HCCA cluster: Cluster_233

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01016493001 No alias 27.3.11 RNA.regulation of transcription.C2H2 zinc finger... 0.04 Gene family
MA_57501g0010 No alias 27.3.11 RNA.regulation of transcription.C2H2 zinc finger... 0.02 Gene family
Solyc03g117070.1.1 Solyc03g117070.1 27.3.11 RNA.regulation of transcription.C2H2 zinc finger... 0.09 Gene family
Solyc04g014540.2.1 Solyc04g014540.2 27.3.11 RNA.regulation of transcription.C2H2 zinc finger... 0.03 Gene family
Solyc08g077000.1.1 Solyc08g077000.1 27.3.11 RNA.regulation of transcription.C2H2 zinc finger... 0.02 Gene family
Solyc09g011120.1.1 Solyc09g011120.1 27.3.11 RNA.regulation of transcription.C2H2 zinc finger... 0.04 Gene family
Solyc09g061870.2.1 Solyc09g061870.2 35.2 not assigned.unknown C2H2-like zinc finger protein 0.03 Gene family
Solyc11g011890.2.1 Solyc11g011890.2 27.3.11 RNA.regulation of transcription.C2H2 zinc finger... 0.06 Gene family
Zm00001d018605 GRMZM2G000126 27.3.11 RNA.regulation of transcription.C2H2 zinc finger... 0.02 Gene family
Zm00001d026034 GRMZM2G086530 No description available 0.02 Gene family

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding ISS Arabidopsis.org
MF GO:0003700 DNA-binding transcription factor activity ISS Arabidopsis.org
CC GO:0005634 nucleus ISM Arabidopsis.org
BP GO:0006355 regulation of transcription, DNA-templated TAS Arabidopsis.org
MF GO:0008270 zinc ion binding ISS Arabidopsis.org
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

No InterPro domains available for this sequence

No external refs found!