Nbi_g30106


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g30106
Cluster HCCA: Cluster_49

Target Alias Description ECC score Gene Family Method Actions
AT1G05750 PDE247, CLB19 Tetratricopeptide repeat (TPR)-like superfamily protein 0.01 OrthoFinder output from all 47 species
Adi_g009533 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g022684 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g024182 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g025081 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g059409 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g085223 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g101336 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Adi_g101344 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g102361 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g18205 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g03700 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ala_g11484 CRR2 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ala_g13276 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g23719 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g31162 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g36220 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g36223 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g36535 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g37733 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g39105 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g09502 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g15903 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Als_g60956 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g04243 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aop_g05575 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g07571 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g16810 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g16850 OTP84 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aop_g16854 EMB2758 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g28296 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g63624 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g67885 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene01654.t1 PTAC9, OSB2,... ssDNA-binding protein *(OSB) & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene02406.t1 Aspi01Gene02406 ssDNA-binding protein *(OSB) & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene10587.t1 CRR2, Aspi01Gene10587 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene13090.t2 Aspi01Gene13090 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene13980.t1 Aspi01Gene13980 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene16353.t1 Aspi01Gene16353 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene17383.t1 OTP84, Aspi01Gene17383 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene20498.t1 CRR2, Aspi01Gene20498 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene24054.t1 OTP82, Aspi01Gene24054 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene27421.t1 Aspi01Gene27421 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene28168.t1 Aspi01Gene28168 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene52145.t1 CRR22, Aspi01Gene52145 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene61045.t1 VAC1, ECB2,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene64478.t1 EMB2758, Aspi01Gene64478 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene66061.t1 Aspi01Gene66061 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene70449.t1 Aspi01Gene70449 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Azfi_s0004.g008305 VAC1, ECB2, ATECB2 ssDNA-binding protein *(OSB) & original description: CDS=82-2724 0.03 OrthoFinder output from all 47 species
Azfi_s0033.g025053 VAC1, ECB2, ATECB2 not classified & original description: CDS=1-2580 0.03 OrthoFinder output from all 47 species
Azfi_s0042.g026907 No alias not classified & original description: CDS=1-447 0.02 OrthoFinder output from all 47 species
Azfi_s0129.g048869 No alias not classified & original description: CDS=1-2157 0.02 OrthoFinder output from all 47 species
Cba_g31685 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.09G069300.1 OTP86, Ceric.09G069300 not classified & original description: pacid=50588354... 0.06 OrthoFinder output from all 47 species
Ceric.18G083800.1 Ceric.18G083800 not classified & original description: pacid=50622461... 0.02 OrthoFinder output from all 47 species
Ceric.22G020200.1 Ceric.22G020200 not classified & original description: pacid=50615278... 0.01 OrthoFinder output from all 47 species
Ceric.22G044500.1 Ceric.22G044500 not classified & original description: pacid=50614334... 0.02 OrthoFinder output from all 47 species
Ceric.25G028400.1 Ceric.25G028400 not classified & original description: pacid=50594666... 0.02 OrthoFinder output from all 47 species
Ceric.30G027600.1 Ceric.30G027600 not classified & original description: pacid=50609466... 0.01 OrthoFinder output from all 47 species
Dac_g02910 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Dac_g15068 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g02969 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g04001 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dde_g05343 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g05964 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g16483 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g17720 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g18063 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g19384 EMB2758 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g22604 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g23994 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g25985 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g26090 EMB2758 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g28401 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g46792 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g19510 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g03727 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g04137 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Len_g04729 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g18040 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g18278 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g18318 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g18598 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g45180 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g54670 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g25864 OSB4 ssDNA-binding protein *(OSB) & original description: none 0.01 OrthoFinder output from all 47 species
Msp_g02475 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g14470 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g16214 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g48539 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g06282 MEF22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g21177 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g24920 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g29304 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g41721 No alias not classified & original description: none 0.12 OrthoFinder output from all 47 species
Ore_g12551 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ore_g15077 CRR2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g17481 EMB2758 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g07132 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g11374 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g12987 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g17052 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g49137 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Pir_g57463 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g60415 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Pir_g63651 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63815 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g63846 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g04531 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g05340 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ppi_g06450 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ppi_g06858 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g07430 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g08859 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g16324 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g29582 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g31303 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g32530 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g33094 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g33539 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g41679 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g42119 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g55132 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g59315 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000052 EMB2758 not classified & original description: CDS=1-1683 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0006.g003163 No alias not classified & original description: CDS=1-2256 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0027.g009681 No alias not classified & original description: CDS=1-2907 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0050.g013864 CRR22 not classified & original description: CDS=1-2397 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0060.g015239 No alias not classified & original description: CDS=1-2529 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0076.g017463 No alias not classified & original description: CDS=1-2316 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0088.g018619 No alias not classified & original description: CDS=1-2157 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0110.g020618 REME1 not classified & original description: CDS=24-1478 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s1579.g028098 No alias not classified & original description: CDS=1-249 0.02 OrthoFinder output from all 47 species
Sam_g01375 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g05036 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g15402 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g19460 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Sam_g27497 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Sam_g37190 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g39952 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Sam_g40571 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Sam_g43933 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g46633 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g51766 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo399 No alias Pentatricopeptide repeat-containing protein At3g03580... 0.09 OrthoFinder output from all 47 species
Spa_g14314 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g21929 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR046849 Eplus_motif 763 787
IPR002885 Pentatricopeptide_repeat 274 323
IPR002885 Pentatricopeptide_repeat 174 220
IPR002885 Pentatricopeptide_repeat 579 626
IPR002885 Pentatricopeptide_repeat 478 524
IPR002885 Pentatricopeptide_repeat 377 424
IPR046848 E_motif 696 758
IPR032867 DYW_dom 794 886
IPR002885 Pentatricopeptide_repeat 452 474
IPR002885 Pentatricopeptide_repeat 554 578
IPR002885 Pentatricopeptide_repeat 653 677
IPR002885 Pentatricopeptide_repeat 148 173
No external refs found!