AT5G10380 (ATRING1, RING1)


Aliases : ATRING1, RING1

Description : RING/U-box superfamily protein


Gene families : OG_01_0000002 (Gene family) Phylogenetic Tree(s): OG0000002_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): AT5G10380
Cluster HCCA cluster: Cluster_180

Target Alias Description ECC score Gene Family Method Actions
AT1G04360 No alias RING/U-box superfamily protein 0.05 Gene family
AT2G18670 No alias RING/U-box superfamily protein 0.02 Gene family
AT2G35000 No alias RING/U-box superfamily protein 0.03 Gene family
AT2G42350 No alias RING/U-box superfamily protein 0.04 Gene family
AT4G09120 No alias RING/U-box superfamily protein 0.03 Gene family
AT4G15975 No alias RING/U-box superfamily protein 0.03 Gene family
GSVIVT01013145001 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
GSVIVT01020665001 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.03 Gene family
GSVIVT01037142001 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
LOC_Os01g20910 Os01g0311100 No description available 0.02 Gene family
LOC_Os02g35329 Os02g0559800 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
LOC_Os02g36330 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
LOC_Os03g44642 No alias No description available 0.02 Gene family
LOC_Os04g37740 Os04g0450400 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
LOC_Os04g49700 Os04g0586700 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
LOC_Os06g34880 Os06g0540200 No description available 0.02 Gene family
MA_201864g0010 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.03 Gene family
MA_214717g0010 No alias No description available 0.03 Gene family
MA_227897g0010 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
MA_280399g0010 No alias No description available 0.03 Gene family
MA_77628g0010 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
MA_80729g0030 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.03 Gene family
MA_85088g0010 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
MA_9989900g0010 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
Smo59303 PACid_15409233 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.03 Gene family
Solyc00g007220.3.1 Solyc00g007220.3 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING ATL8 0.02 Gene family
Solyc01g066430.3.1 Solyc01g066430.3 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
Solyc01g100095.1.1 Solyc01g100095.1 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.03 Gene family
Solyc03g123680.1.1 Solyc03g123680.1 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.03 Gene family
Solyc07g053420.3.1 Solyc07g053420.3 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
Solyc10g008080.2.1 Solyc10g008080.2 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
Solyc10g081790.1.1 Solyc10g081790.1 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.03 Gene family
Solyc11g010330.2.1 Solyc11g010330.2 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.03 Gene family
Solyc12g055710.1.1 Solyc12g055710.1 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.03 Gene family
Solyc12g087860.2.1 Solyc12g087860.2 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
Zm00001d005936 GRMZM2G015753 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
Zm00001d009106 GRMZM2G004519 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.03 Gene family
Zm00001d016840 GRMZM2G460958 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.03 Gene family
Zm00001d020789 GRMZM2G082653 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.03 Gene family
Zm00001d022154 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.03 Gene family
Zm00001d028508 No alias 2.2.1.5 major CHO metabolism.degradation.sucrose.Susy... 0.02 Gene family
Zm00001d031100 No alias No description available 0.02 Gene family
Zm00001d037192 GRMZM2G329195 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.03 Gene family
Zm00001d050798 GRMZM2G044773 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.03 Gene family

Type GO Term Name Evidence Source
BP GO:0000165 MAPK cascade RCA Arabidopsis.org
BP GO:0002238 response to molecule of fungal origin IEP Arabidopsis.org
MF GO:0004842 ubiquitin-protein transferase activity IDA Arabidopsis.org
CC GO:0005576 extracellular region ISM Arabidopsis.org
CC GO:0005886 plasma membrane IDA Arabidopsis.org
BP GO:0006355 regulation of transcription, DNA-templated RCA Arabidopsis.org
BP GO:0006612 protein targeting to membrane RCA Arabidopsis.org
MF GO:0008270 zinc ion binding ISS Arabidopsis.org
BP GO:0009617 response to bacterium IEP Arabidopsis.org
BP GO:0009617 response to bacterium RCA Arabidopsis.org
BP GO:0009627 systemic acquired resistance RCA Arabidopsis.org
BP GO:0009862 systemic acquired resistance, salicylic acid mediated signaling pathway RCA Arabidopsis.org
BP GO:0009867 jasmonic acid mediated signaling pathway RCA Arabidopsis.org
BP GO:0010200 response to chitin IEP Arabidopsis.org
BP GO:0010310 regulation of hydrogen peroxide metabolic process RCA Arabidopsis.org
BP GO:0010363 regulation of plant-type hypersensitive response RCA Arabidopsis.org
BP GO:0012501 programmed cell death IC Arabidopsis.org
BP GO:0016567 protein ubiquitination IDA Arabidopsis.org
BP GO:0019761 glucosinolate biosynthetic process RCA Arabidopsis.org
BP GO:0031348 negative regulation of defense response RCA Arabidopsis.org
BP GO:0034976 response to endoplasmic reticulum stress RCA Arabidopsis.org
BP GO:0035304 regulation of protein dephosphorylation RCA Arabidopsis.org
BP GO:0043068 positive regulation of programmed cell death IMP Arabidopsis.org
BP GO:0051865 protein autoubiquitination IDA Arabidopsis.org
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001841 Znf_RING 134 177
No external refs found!