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  5. Nbi_g30050

Nbi_g30050 (BEH3)


Aliases : BEH3

Description : BZR-type transcription factor & original description: none


Gene families : OG0000871 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000871_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g30050
Cluster HCCA: Cluster_59

Target Alias Description ECC score Gene Family Method Actions
AT4G18890 BEH3 BES1/BZR1 homolog 3 0.03 OrthoFinder output from all 47 species
Aob_g01438 BEH4 BZR-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g37319 BEH3 BZR-type transcription factor & original description: none 0.07 OrthoFinder output from all 47 species
Ehy_g07392 BEH4 BZR-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
MA_11814g0010 BEH4 transcription factor (BES/BZR). transcription factor (BZR) 0.02 OrthoFinder output from all 47 species
MA_482543g0010 BEH4 transcription factor (BES/BZR). transcription factor (BZR) 0.03 OrthoFinder output from all 47 species
MA_58985g0010 BEH3 transcription factor (BES/BZR). transcription factor (BZR) 0.02 OrthoFinder output from all 47 species
Ppi_g11159 BEH3 BZR-type transcription factor & original description: none 0.14 OrthoFinder output from all 47 species
Sacu_v1.1_s0226.g026334 BEH2 BZR-type transcription factor & original description: CDS=1-1944 0.04 OrthoFinder output from all 47 species
Spa_g25268 BZR1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g45566 BEH3 BZR-type transcription factor & original description: none 0.2 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004843 cysteine-type deubiquitinase activity IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
MF GO:0019783 ubiquitin-like protein peptidase activity IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
MF GO:0042393 histone binding IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0101005 deubiquitinase activity IEP HCCA
MF GO:0140359 ABC-type transporter activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR008540 BES1_N 41 153
No external refs found!