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  5. Nbi_g30009

Nbi_g30009


Description : small subunit sigma of AP-4 vacuole cargo adaptor complex & original description: none


Gene families : OG0006894 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006894_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: Nbi_g30009

Target Alias Description ECC score Gene Family Method Actions
Aspi01Gene10259.t1 Aspi01Gene10259 small subunit sigma of AP-4 vacuole cargo adaptor... 0.03 OrthoFinder output from all 47 species
Dcu_g13953 No alias small subunit sigma of AP-4 vacuole cargo adaptor... 0.03 OrthoFinder output from all 47 species
MA_9040447g0010 No alias AP-4 complex subunit sigma OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP HCCA
MF GO:0003746 translation elongation factor activity IEP HCCA
MF GO:0004417 hydroxyethylthiazole kinase activity IEP HCCA
BP GO:0006066 alcohol metabolic process IEP HCCA
BP GO:0006414 translational elongation IEP HCCA
BP GO:0006766 vitamin metabolic process IEP HCCA
BP GO:0006767 water-soluble vitamin metabolic process IEP HCCA
BP GO:0006772 thiamine metabolic process IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
BP GO:0009110 vitamin biosynthetic process IEP HCCA
BP GO:0009228 thiamine biosynthetic process IEP HCCA
BP GO:0032259 methylation IEP HCCA
BP GO:0034308 primary alcohol metabolic process IEP HCCA
BP GO:0034309 primary alcohol biosynthetic process IEP HCCA
BP GO:0042364 water-soluble vitamin biosynthetic process IEP HCCA
BP GO:0042723 thiamine-containing compound metabolic process IEP HCCA
BP GO:0042724 thiamine-containing compound biosynthetic process IEP HCCA
BP GO:0044272 sulfur compound biosynthetic process IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
BP GO:0046165 alcohol biosynthetic process IEP HCCA
BP GO:0072527 pyrimidine-containing compound metabolic process IEP HCCA
BP GO:0072528 pyrimidine-containing compound biosynthetic process IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
BP GO:1901615 organic hydroxy compound metabolic process IEP HCCA
BP GO:1901617 organic hydroxy compound biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR022775 AP_mu_sigma_su 28 167
No external refs found!