AT5G09510


Description : Ribosomal protein S19 family protein


Gene families : OG_01_0002321 (Gene family) Phylogenetic Tree(s): OG0002321_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): AT5G09510
Cluster HCCA cluster: Cluster_85

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00020830.61 No alias 29.2.1.2.1.15 protein.synthesis.ribosomal... 0.29 Gene family
Cre08.g360900 No alias 29.2.1.2.1.15 protein.synthesis.ribosomal... 0.47 Gene family
GSVIVT01000754001 No alias 29.2.1.2.1.15 protein.synthesis.ribosomal... 0.28 Gene family
GSVIVT01018113001 No alias 29.2.1.2.1.15 protein.synthesis.ribosomal... 0.3 Gene family
LOC_Os03g58430 Os03g0798600 29.2.1.2.1.15 protein.synthesis.ribosomal... 0.36 Gene family
LOC_Os07g08660 Os07g0184300 29.2.1.2.1.15 protein.synthesis.ribosomal... 0.29 Gene family
MA_14543g0010 No alias 29.2.1.2.1.15 protein.synthesis.ribosomal... 0.08 Gene family
MA_18691g0010 No alias 29.2.1.2.1.15 protein.synthesis.ribosomal... 0.12 Gene family
Smo172403 PACid_15411821 No description available 0.15 Gene family
Solyc02g082000.3.1 Solyc02g082000.3 29.2.1.2.1.15 protein.synthesis.ribosomal... 0.41 Gene family
Solyc09g083370.3.1 Solyc09g083370.3 29.2.1.2.1.15 protein.synthesis.ribosomal... 0.38 Gene family
Zm00001d007819 GRMZM2G080222 29.2.1.2.1.15 protein.synthesis.ribosomal... 0.41 Gene family
Zm00001d018979 GRMZM2G102075 29.2.1.2.1.15 protein.synthesis.ribosomal... 0.27 Gene family

Type GO Term Name Evidence Source
BP GO:0001510 RNA methylation RCA Arabidopsis.org
MF GO:0003735 structural constituent of ribosome ISS Arabidopsis.org
CC GO:0005730 nucleolus IDA Arabidopsis.org
CC GO:0005737 cytoplasm ISM Arabidopsis.org
CC GO:0005774 vacuolar membrane IDA Arabidopsis.org
BP GO:0006412 translation ISS Arabidopsis.org
CC GO:0009506 plasmodesma IDA Arabidopsis.org
CC GO:0009507 chloroplast ISM Arabidopsis.org
CC GO:0022626 cytosolic ribosome IDA Arabidopsis.org
CC GO:0022627 cytosolic small ribosomal subunit IDA Arabidopsis.org
CC GO:0022627 cytosolic small ribosomal subunit ISS Arabidopsis.org
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002222 Ribosomal_S19 50 135
No external refs found!