1. Home
  2. Species
  3. Nephrolepis biserrata
  4. Sequence
  5. Nbi_g29973

Nbi_g29973


Description : regulatory component *(VTA1) of VPS4-VTA1 ESCRT-disassembly complex & original description: none


Gene families : OG0003219 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003219_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g29973
Cluster HCCA: Cluster_129

Target Alias Description ECC score Gene Family Method Actions
Als_g19878 No alias regulatory component *(VTA1) of VPS4-VTA1... 0.02 OrthoFinder output from all 47 species
Aspi01Gene61913.t1 Aspi01Gene61913 regulatory component *(VTA1) of VPS4-VTA1... 0.03 OrthoFinder output from all 47 species
Ceric.07G028300.1 Ceric.07G028300 regulatory component *(VTA1) of VPS4-VTA1... 0.04 OrthoFinder output from all 47 species
Cre03.g145227 No alias Vesicle trafficking.endomembrane trafficking.ESCRT... 0.01 OrthoFinder output from all 47 species
Spa_g07862 No alias regulatory component *(VTA1) of VPS4-VTA1... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004601 peroxidase activity IEP HCCA
MF GO:0005509 calcium ion binding IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
InterPro domains Description Start Stop
IPR041212 Vta1_C 369 404
IPR039431 Vta1/CALS_N 14 148
No external refs found!