AT5G09280


Description : Pectin lyase-like superfamily protein


Gene families : OG_01_0003964 (Gene family) Phylogenetic Tree(s): OG0003964_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): AT5G09280
Cluster HCCA cluster: Cluster_17

Target Alias Description ECC score Gene Family Method Actions
MA_10205415g0010 No alias 10.6.3 cell wall.degradation.pectate lyases and... 0.02 Gene family
MA_474372g0010 No alias 10.6.3 cell wall.degradation.pectate lyases and... 0.02 Gene family

Type GO Term Name Evidence Source
CC GO:0005886 plasma membrane ISM Arabidopsis.org
MF GO:0016829 lyase activity ISS Arabidopsis.org
MF GO:0030570 pectate lyase activity ISS Arabidopsis.org
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002022 Pec_lyase 78 238
No external refs found!