AT5G08720


Description : CONTAINS InterPro DOMAIN/s: Streptomyces cyclase/dehydrase (InterPro:IPR005031); BEST Arabidopsis thaliana protein match is: Polyketide cyclase / dehydrase and lipid transport protein (TAIR:AT4G01650.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).


Gene families : OG_01_0007165 (Gene family) Phylogenetic Tree(s): OG0007165_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): AT5G08720
Cluster HCCA cluster: Cluster_87

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01022377001 No alias 35.2 not assigned.unknown 0.09 Gene family
LOC_Os03g62170 Os03g0837900 35.2 not assigned.unknown 0.06 Gene family
Solyc05g009080.3.1 Solyc05g009080.3 35.2 not assigned.unknown 0.11 Gene family
Zm00001d034779 GRMZM2G167428 35.2 not assigned.unknown 0.05 Gene family

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Arabidopsis.org
MF GO:0005515 protein binding IPI Arabidopsis.org
CC GO:0005739 mitochondrion IDA Arabidopsis.org
BP GO:0008150 biological_process ND Arabidopsis.org
CC GO:0009507 chloroplast ISM Arabidopsis.org
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR005031 COQ10_START 343 474
IPR005031 COQ10_START 108 239
No external refs found!