AT5G08510


Description : Pentatricopeptide repeat (PPR) superfamily protein


Gene families : OG_01_0002071 (Gene family) Phylogenetic Tree(s): OG0002071_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): AT5G08510
Cluster HCCA cluster: Cluster_107

Target Alias Description ECC score Gene Family Method Actions
LOC_Os11g44930 Os11g0673000 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.05 Gene family
Smo103939 PACid_15412875 No description available 0.02 Gene family
Smo107480 PACid_15420840 No description available 0.02 Gene family
Smo109195 PACid_15402085 No description available 0.02 Gene family
Smo110980 PACid_15411445 No description available 0.02 Gene family
Zm00001d042380 GRMZM2G115152 No description available 0.05 Gene family
Zm00001d048670 GRMZM2G444222 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.04 Gene family

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Arabidopsis.org
CC GO:0005739 mitochondrion ISM Arabidopsis.org
BP GO:0008150 biological_process ND Arabidopsis.org
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 177 226
IPR002885 Pentatricopeptide_repeat 281 327
IPR002885 Pentatricopeptide_repeat 252 276
IPR002885 Pentatricopeptide_repeat 355 380
IPR002885 Pentatricopeptide_repeat 110 146
No external refs found!