AT5G08330


Description : TCP family transcription factor


Gene families : OG_01_0000264 (Gene family) Phylogenetic Tree(s): OG0000264_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): AT5G08330
Cluster HCCA cluster: Cluster_141

Target Alias Description ECC score Gene Family Method Actions
AT2G45680 No alias TCP family transcription factor 0.04 Gene family
Solyc03g116320.3.1 Solyc03g116320.3 17.2.3 hormone... 0.04 Gene family
Solyc04g009180.2.1 Solyc04g009180.2 27.3.29 RNA.regulation of transcription.TCP... 0.03 Gene family
Solyc05g007420.1.1 Solyc05g007420.1 27.3.29 RNA.regulation of transcription.TCP... 0.02 Gene family
Solyc09g008030.1.1 Solyc09g008030.1 27.3.29 RNA.regulation of transcription.TCP... 0.03 Gene family
Zm00001d018045 GRMZM2G077755 27.3.29 RNA.regulation of transcription.TCP... 0.04 Gene family
Zm00001d023565 GRMZM2G093895 27.3.29 RNA.regulation of transcription.TCP... 0.04 Gene family
Zm00001d025896 GRMZM2G465091 17.2.3 hormone... 0.07 Gene family
Zm00001d031725 GRMZM2G107031 27.3.29 RNA.regulation of transcription.TCP... 0.03 Gene family
Zm00001d041866 GRMZM2G089638 27.3.29 RNA.regulation of transcription.TCP... 0.03 Gene family

Type GO Term Name Evidence Source
BP GO:0000165 MAPK cascade RCA Arabidopsis.org
MF GO:0003700 DNA-binding transcription factor activity IDA Arabidopsis.org
MF GO:0003700 DNA-binding transcription factor activity ISS Arabidopsis.org
MF GO:0005515 protein binding IPI Arabidopsis.org
CC GO:0005634 nucleus IDA Arabidopsis.org
CC GO:0005634 nucleus ISM Arabidopsis.org
BP GO:0006355 regulation of transcription, DNA-templated RCA Arabidopsis.org
BP GO:0006355 regulation of transcription, DNA-templated TAS Arabidopsis.org
BP GO:0006612 protein targeting to membrane RCA Arabidopsis.org
BP GO:0009617 response to bacterium RCA Arabidopsis.org
BP GO:0009862 systemic acquired resistance, salicylic acid mediated signaling pathway RCA Arabidopsis.org
BP GO:0009867 jasmonic acid mediated signaling pathway RCA Arabidopsis.org
BP GO:0009965 leaf morphogenesis RCA Arabidopsis.org
BP GO:0010310 regulation of hydrogen peroxide metabolic process RCA Arabidopsis.org
BP GO:0010363 regulation of plant-type hypersensitive response RCA Arabidopsis.org
BP GO:0030154 cell differentiation RCA Arabidopsis.org
BP GO:0031348 negative regulation of defense response RCA Arabidopsis.org
BP GO:0035304 regulation of protein dephosphorylation RCA Arabidopsis.org
BP GO:0042752 regulation of circadian rhythm IMP Arabidopsis.org
BP GO:0043433 negative regulation of DNA-binding transcription factor activity IMP Arabidopsis.org
BP GO:0045893 positive regulation of transcription, DNA-templated RCA Arabidopsis.org
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR017887 TF_TCP_subgr 31 107
No external refs found!