AT5G08280 (HEMC)


Aliases : HEMC

Description : hydroxymethylbilane synthase


Gene families : OG_01_0005554 (Gene family) Phylogenetic Tree(s): OG0005554_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): AT5G08280
Cluster HCCA cluster: Cluster_140

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000241.50 No alias 19.5 tetrapyrrole synthesis.porphobilinogen deaminase... 0.04 Gene family
Cre16.g663900 No alias 19.5 tetrapyrrole synthesis.porphobilinogen deaminase... 0.06 Gene family
GSVIVT01002505001 No alias 19.5 tetrapyrrole synthesis.porphobilinogen deaminase... 0.23 Gene family
LOC_Os02g07230 Os02g0168800 19.5 tetrapyrrole synthesis.porphobilinogen deaminase... 0.17 Gene family
MA_10437242g0030 No alias 19.5 tetrapyrrole synthesis.porphobilinogen deaminase... 0.08 Gene family
Smo164683 PACid_15412155 No description available 0.1 Gene family
Solyc07g066470.3.1 Solyc07g066470.3 19.5 tetrapyrrole synthesis.porphobilinogen deaminase... 0.16 Gene family
Zm00001d015366 GRMZM2G026117 19.5 tetrapyrrole synthesis.porphobilinogen deaminase... 0.2 Gene family
Zm00001d053807 GRMZM2G041159 19.5 tetrapyrrole synthesis.porphobilinogen deaminase... 0.15 Gene family

Type GO Term Name Evidence Source
MF GO:0004418 hydroxymethylbilane synthase activity IDA Arabidopsis.org
MF GO:0004418 hydroxymethylbilane synthase activity IMP Arabidopsis.org
BP GO:0006098 pentose-phosphate shunt RCA Arabidopsis.org
BP GO:0006364 rRNA processing RCA Arabidopsis.org
BP GO:0006744 ubiquinone biosynthetic process RCA Arabidopsis.org
BP GO:0006779 porphyrin-containing compound biosynthetic process TAS Arabidopsis.org
BP GO:0009073 aromatic amino acid family biosynthetic process RCA Arabidopsis.org
BP GO:0009409 response to cold RCA Arabidopsis.org
CC GO:0009507 chloroplast IDA Arabidopsis.org
CC GO:0009507 chloroplast ISM Arabidopsis.org
CC GO:0009570 chloroplast stroma IDA Arabidopsis.org
BP GO:0009697 salicylic acid biosynthetic process RCA Arabidopsis.org
BP GO:0009814 defense response, incompatible interaction RCA Arabidopsis.org
CC GO:0009941 chloroplast envelope IDA Arabidopsis.org
BP GO:0009965 leaf morphogenesis RCA Arabidopsis.org
BP GO:0015995 chlorophyll biosynthetic process RCA Arabidopsis.org
BP GO:0015995 chlorophyll biosynthetic process TAS Arabidopsis.org
BP GO:0019288 isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway RCA Arabidopsis.org
BP GO:0019344 cysteine biosynthetic process RCA Arabidopsis.org
BP GO:0019684 photosynthesis, light reaction RCA Arabidopsis.org
BP GO:0030154 cell differentiation RCA Arabidopsis.org
BP GO:0042742 defense response to bacterium IEP Arabidopsis.org
BP GO:0042742 defense response to bacterium RCA Arabidopsis.org
BP GO:0045893 positive regulation of transcription, DNA-templated RCA Arabidopsis.org
CC GO:0048046 apoplast IDA Arabidopsis.org
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR022418 Porphobilinogen_deaminase_C 301 372
IPR022417 Porphobilin_deaminase_N 75 286
No external refs found!