AT5G08130 (BIM1)


Aliases : BIM1

Description : basic helix-loop-helix (bHLH) DNA-binding superfamily protein


Gene families : OG_01_0001655 (Gene family) Phylogenetic Tree(s): OG0001655_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): AT5G08130
Cluster HCCA cluster: Cluster_170

Target Alias Description ECC score Gene Family Method Actions
Zm00001d020834 GRMZM2G089501 27.3.6 RNA.regulation of transcription.bHLH,Basic... 0.03 Gene family

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IDA Arabidopsis.org
MF GO:0003677 DNA binding ISS Arabidopsis.org
MF GO:0003700 DNA-binding transcription factor activity IDA Arabidopsis.org
MF GO:0003700 DNA-binding transcription factor activity ISS Arabidopsis.org
MF GO:0005515 protein binding IPI Arabidopsis.org
CC GO:0005634 nucleus IDA Arabidopsis.org
CC GO:0005634 nucleus ISM Arabidopsis.org
BP GO:0006351 transcription, DNA-templated IMP Arabidopsis.org
BP GO:0006355 regulation of transcription, DNA-templated TAS Arabidopsis.org
BP GO:0009742 brassinosteroid mediated signaling pathway IGI Arabidopsis.org
BP GO:0009855 determination of bilateral symmetry RCA Arabidopsis.org
BP GO:0009944 polarity specification of adaxial/abaxial axis RCA Arabidopsis.org
BP GO:0010072 primary shoot apical meristem specification RCA Arabidopsis.org
BP GO:1902448 positive regulation of shade avoidance IMP Arabidopsis.org
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR011598 bHLH_dom 158 207
No external refs found!