AT5G07500 (PEI1)


Aliases : PEI1

Description : Zinc finger C-x8-C-x5-C-x3-H type family protein


Gene families : OG_01_0003078 (Gene family) Phylogenetic Tree(s): OG0003078_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): AT5G07500
Cluster HCCA cluster: Cluster_154

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01013901001 No alias 27.3.12 RNA.regulation of transcription.C3H zinc finger... 0.06 Gene family
Solyc05g041715.1.1 Solyc05g041715.1 27.3.12 RNA.regulation of transcription.C3H zinc finger... 0.04 Gene family
Solyc05g042181.1.1 Solyc05g042181.1 27.3.12 RNA.regulation of transcription.C3H zinc finger... 0.02 Gene family
Solyc05g043232.1.1 Solyc05g043232.1 No description available 0.03 Gene family
Solyc05g043234.1.1 Solyc05g043234.1 27.3.12 RNA.regulation of transcription.C3H zinc finger... 0.03 Gene family
Solyc05g043236.1.1 Solyc05g043236.1 27.3.12 RNA.regulation of transcription.C3H zinc finger... 0.02 Gene family
Solyc05g052055.1.1 Solyc05g052055.1 27.3.12 RNA.regulation of transcription.C3H zinc finger... 0.03 Gene family
Solyc09g014624.1.1 Solyc09g014624.1 No description available 0.03 Gene family
Solyc09g014628.1.1 Solyc09g014628.1 27.3.12 RNA.regulation of transcription.C3H zinc finger... 0.02 Gene family

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding ISS Arabidopsis.org
MF GO:0003700 DNA-binding transcription factor activity ISS Arabidopsis.org
CC GO:0005634 nucleus ISM Arabidopsis.org
BP GO:0006355 regulation of transcription, DNA-templated RCA Arabidopsis.org
BP GO:0009793 embryo development ending in seed dormancy IMP Arabidopsis.org
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR000571 Znf_CCCH 97 117
No external refs found!