AT5G07040


Description : RING/U-box superfamily protein


Gene families : OG_01_0000002 (Gene family) Phylogenetic Tree(s): OG0000002_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): AT5G07040
Cluster HCCA cluster: Cluster_188

Target Alias Description ECC score Gene Family Method Actions
AT1G35330 No alias RING/U-box superfamily protein 0.03 Gene family
AT1G49230 No alias RING/U-box superfamily protein 0.03 Gene family
AT2G35000 No alias RING/U-box superfamily protein 0.03 Gene family
AT3G14320 No alias Zinc finger, C3HC4 type (RING finger) family protein 0.06 Gene family
AT3G60966 No alias RING/U-box superfamily protein 0.03 Gene family
GSVIVT01009098001 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
GSVIVT01019530001 No alias 35.2 not assigned.unknown RING/U-box superfamily protein 0.02 Gene family
GSVIVT01020665001 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.03 Gene family
GSVIVT01028306001 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
LOC_Os02g15060 Os02g0248440 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.01 Gene family
LOC_Os02g35329 Os02g0559800 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.01 Gene family
LOC_Os02g36300 Os02g0572200 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.01 Gene family
LOC_Os03g57410 Os03g0788100 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.01 Gene family
LOC_Os06g34620 Os06g0537300 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
MA_10431388g0020 No alias No description available 0.03 Gene family
MA_132693g0010 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.01 Gene family
MA_144298g0010 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.01 Gene family
MA_26001g0020 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.01 Gene family
MA_43543g0010 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
MA_85088g0010 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.01 Gene family
MA_94359g0010 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.01 Gene family
Solyc03g005490.3.1 Solyc03g005490.3 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.03 Gene family
Solyc04g074790.2.1 Solyc04g074790.2 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
Solyc04g082690.1.1 Solyc04g082690.1 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING ATL8 0.02 Gene family
Solyc07g053420.3.1 Solyc07g053420.3 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
Solyc09g066300.2.1 Solyc09g066300.2 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.07 Gene family
Zm00001d003497 GRMZM2G171277 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.03 Gene family
Zm00001d009894 No alias No description available 0.02 Gene family
Zm00001d013110 GRMZM2G028188 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
Zm00001d021316 GRMZM2G449875 No description available 0.01 Gene family

Type GO Term Name Evidence Source
CC GO:0005634 nucleus ISM Arabidopsis.org
MF GO:0008270 zinc ion binding ISS Arabidopsis.org
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001841 Znf_RING 94 136
No external refs found!