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  5. Nbi_g29754

Nbi_g29754


Description : not classified & original description: none


Gene families : OG0000374 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000374_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g29754

Target Alias Description ECC score Gene Family Method Actions
Ala_g10098 No alias RING-H2-class CTL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Als_g15672 No alias RING-H2-class CTL-subclass E3 ubiquitin ligase &... 0.05 OrthoFinder output from all 47 species
Aop_g18311 No alias RING-H2-class CTL-subclass E3 ubiquitin ligase &... 0.04 OrthoFinder output from all 47 species
Cba_g15236 No alias regulatory E3 ubiquitin ligase (MREL/JUL) of microtubule... 0.04 OrthoFinder output from all 47 species
Ceric.01G128900.1 Ceric.01G128900 RING-H2-class CTL-subclass E3 ubiquitin ligase &... 0.04 OrthoFinder output from all 47 species
LOC_Os05g48970.1 LOC_Os05g48970 Probable E3 ubiquitin-protein ligase ZFP1 OS=Oryza... 0.03 OrthoFinder output from all 47 species
Solyc12g014070.2.1 Solyc12g014070 Probable E3 ubiquitin-protein ligase ZFP1 OS=Oryza... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0036297 interstrand cross-link repair IEP HCCA
CC GO:0043240 Fanconi anaemia nuclear complex IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA

No InterPro domains available for this sequence

No external refs found!