not classified & original description: none 0.11 OrthoFinder output from all 47 species Len_g21940 No alias not classified & original description: none 0.14 OrthoFinder output from all 47 species Len_g25026 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species Len_g26932 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species Len_g27073 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species Len_g27752 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species Len_g28936 No alias not classified & original description: none 0.11 OrthoFinder output from all 47 species Len_g29639 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species Len_g31011 No alias not classified & original description: none 0.11 OrthoFinder output from all 47 species Len_g35692 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species Len_g36103 No alias not classified & original description: none 0.1 OrthoFinder output from all 47 species Len_g36546 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species Len_g38502 No alias not classified & original description: none 0.1 OrthoFinder output from all 47 species Len_g39453 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species Len_g39608 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species Len_g40324 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species Len_g40612 No alias not classified & original description: none 0.14 OrthoFinder output from all 47 species Len_g40966 No alias not classified & original description: none 0.13 OrthoFinder output from all 47 species Len_g41562 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species Len_g47629 No alias not classified & original description: none 0.16 OrthoFinder output from all 47 species Len_g48324 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species Len_g50677 No alias not classified & original description: none 0.22 OrthoFinder output from all 47 species Len_g51000 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species Len_g51261 No alias not classified & original description: none 0.16 OrthoFinder output from all 47 species Len_g52586 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species Len_g52980 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species Len_g54031 No alias not classified & original description: none 0.1 OrthoFinder output from all 47 species Len_g54065 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species Len_g54562 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species Len_g54847 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species Len_g55544 No alias not classified & original description: none 0.18 OrthoFinder output from all 47 species Len_g56399 No alias not classified & original description: none 0.1 OrthoFinder output from all 47 species Len_g56537 No alias not classified & original description: none 0.12 OrthoFinder output from all 47 species Len_g56852 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species Len_g57524 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species Len_g57525 No alias not classified & original description: none 0.14 OrthoFinder output from all 47 species Len_g58497 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species Len_g58650 No alias not classified & original description: none 0.11 OrthoFinder output from all 47 species Len_g59076 No alias not classified & original description: none 0.1 OrthoFinder output from all 47 species Lfl_g00377 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species Lfl_g05107 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species Lfl_g06931 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species Lfl_g07230 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species Lfl_g08573 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species Lfl_g08587 No alias not classified & original description: none 0.13 OrthoFinder output from all 47 species Lfl_g08692 No alias not classified & original description: none 0.12 OrthoFinder output from all 47 species Lfl_g10451 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species Lfl_g10603 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species Lfl_g10852 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species Lfl_g11047 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species Lfl_g11948 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species Lfl_g12429 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species Lfl_g12508 No alias not classified & original description: none 0.1 OrthoFinder output from all 47 species Lfl_g17249 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species Lfl_g17553 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species Lfl_g19394 No alias not classified & original description: none 0.12 OrthoFinder output from all 47 species Lfl_g25604 No alias not classified & original description: none 0.11 OrthoFinder output from all 47 species Lfl_g26818 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species Lfl_g27781 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species Lfl_g28124 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species Nbi_g29734 details
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  5. Nbi_g29734

Nbi_g29734 (DPE1)


Aliases : DPE1

Description : plastidial glucanotransferase *(DPE1) & original description: none


Gene families : OG0006041 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006041_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g29734
Cluster HCCA: Cluster_34

Target Alias Description ECC score Gene Family Method Actions
Ore_g16990 DPE1 plastidial glucanotransferase *(DPE1) & original... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004134 4-alpha-glucanotransferase activity IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0004843 cysteine-type deubiquitinase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
CC GO:0005856 cytoskeleton IEP HCCA
CC GO:0005885 Arp2/3 protein complex IEP HCCA
BP GO:0005984 disaccharide metabolic process IEP HCCA
BP GO:0005991 trehalose metabolic process IEP HCCA
BP GO:0005992 trehalose biosynthetic process IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0007015 actin filament organization IEP HCCA
BP GO:0008104 protein localization IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
BP GO:0009311 oligosaccharide metabolic process IEP HCCA
BP GO:0009312 oligosaccharide biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0015031 protein transport IEP HCCA
CC GO:0015629 actin cytoskeleton IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0019783 ubiquitin-like protein peptidase activity IEP HCCA
MF GO:0019899 enzyme binding IEP HCCA
MF GO:0031267 small GTPase binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0034314 Arp2/3 complex-mediated actin nucleation IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
MF GO:0043168 anion binding IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0045010 actin nucleation IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046351 disaccharide biosynthetic process IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
MF GO:0051020 GTPase binding IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
BP GO:0097435 supramolecular fiber organization IEP HCCA
MF GO:0101005 deubiquitinase activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR003385 Glyco_hydro_77 140 607
No external refs found!