AT5G06460 (ATUBA2, UBA 2)


Aliases : ATUBA2, UBA 2

Description : ubiquitin activating enzyme 2


Gene families : OG_01_0001442 (Gene family) Phylogenetic Tree(s): OG0001442_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): AT5G06460
Cluster HCCA cluster: Cluster_171

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01024680001 No alias 29.5.11.2 protein.degradation.ubiquitin.E1 Encodes a... 0.02 Gene family
Zm00001d005085 GRMZM5G800842 29.5.11.2 protein.degradation.ubiquitin.E1 Encodes a... 0.03 Gene family
Zm00001d023222 GRMZM2G057441 29.5.11.2 protein.degradation.ubiquitin.E1 Encodes a... 0.03 Gene family

Type GO Term Name Evidence Source
BP GO:0000741 karyogamy RCA Arabidopsis.org
MF GO:0004839 ubiquitin activating enzyme activity IMP Arabidopsis.org
MF GO:0004839 ubiquitin activating enzyme activity ISS Arabidopsis.org
MF GO:0004842 ubiquitin-protein transferase activity IDA Arabidopsis.org
CC GO:0005634 nucleus TAS Arabidopsis.org
CC GO:0005829 cytosol IDA Arabidopsis.org
BP GO:0006310 DNA recombination RCA Arabidopsis.org
BP GO:0006342 chromatin silencing RCA Arabidopsis.org
BP GO:0006511 ubiquitin-dependent protein catabolic process TAS Arabidopsis.org
BP GO:0009560 embryo sac egg cell differentiation RCA Arabidopsis.org
BP GO:0009640 photomorphogenesis RCA Arabidopsis.org
BP GO:0010332 response to gamma radiation RCA Arabidopsis.org
BP GO:0010564 regulation of cell cycle process RCA Arabidopsis.org
BP GO:0016567 protein ubiquitination IDA Arabidopsis.org
BP GO:0016567 protein ubiquitination RCA Arabidopsis.org
BP GO:0016571 histone methylation RCA Arabidopsis.org
BP GO:0016579 protein deubiquitination RCA Arabidopsis.org
BP GO:0032204 regulation of telomere maintenance RCA Arabidopsis.org
BP GO:0043247 telomere maintenance in response to DNA damage RCA Arabidopsis.org
BP GO:0045893 positive regulation of transcription, DNA-templated RCA Arabidopsis.org
BP GO:0051567 histone H3-K9 methylation RCA Arabidopsis.org
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR018965 Ub-activating_enz_E1_C 983 1072
IPR019572 UBA_E1_Cys 659 912
IPR000594 ThiF_NAD_FAD-bd 472 971
IPR032420 E1_4HB 321 390
IPR000594 ThiF_NAD_FAD-bd 76 450
IPR032418 E1_FCCH 249 320
No external refs found!