1. Home
  2. Species
  3. Nephrolepis biserrata
  4. Sequence
  5. Nbi_g29646

Nbi_g29646 (NPQ1, AVDE1)


Aliases : NPQ1, AVDE1

Description : violaxanthin de-epoxidase *(VDE) & original description: none


Gene families : OG0006528 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006528_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g29646

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00117p00058770 NPQ1, AVDE1,... Secondary metabolism.terpenoids.terpenoid... 0.03 OrthoFinder output from all 47 species
Als_g11360 NPQ1, AVDE1 violaxanthin de-epoxidase *(VDE) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g19248 NPQ1, AVDE1 violaxanthin de-epoxidase *(VDE) & original description: none 0.06 OrthoFinder output from all 47 species
Cba_g07958 NPQ1, AVDE1 violaxanthin de-epoxidase *(VDE) & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g05686 NPQ1, AVDE1 violaxanthin de-epoxidase *(VDE) & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g12644 NPQ1, AVDE1 violaxanthin de-epoxidase *(VDE) & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g39279 No alias violaxanthin de-epoxidase *(VDE) & original description: none 0.02 OrthoFinder output from all 47 species
Solyc04g050930.3.1 NPQ1, AVDE1,... violaxanthin de-epoxidase. violaxanthin de-epoxidase (VDE) 0.03 OrthoFinder output from all 47 species
Spa_g43709 NPQ1, AVDE1 violaxanthin de-epoxidase *(VDE) & original description: none 0.08 OrthoFinder output from all 47 species
Zm00001e008403_P001 NPQ1, AVDE1,... violaxanthin de-epoxidase. violaxanthin de-epoxidase (VDE) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046422 violaxanthin de-epoxidase activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0008519 ammonium transmembrane transporter activity IEP HCCA
MF GO:0015267 channel activity IEP HCCA
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0022890 inorganic cation transmembrane transporter activity IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
BP GO:0072488 ammonium transmembrane transport IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR010788 VDE_dom 145 385
No external refs found!