AT5G05780 (ATHMOV34, AE3, RPN8A)


Aliases : ATHMOV34, AE3, RPN8A

Description : RP non-ATPase subunit 8A


Gene families : OG_01_0004685 (Gene family) Phylogenetic Tree(s): OG0004685_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): AT5G05780
Cluster HCCA cluster: Cluster_277

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000403.78 No alias 29.5.11.20 protein.degradation.ubiquitin.proteasom... 0.03 Gene family
Cre06.g278256 No alias 29.5.11.20 protein.degradation.ubiquitin.proteasom... 0.09 Gene family
LOC_Os04g56646 Os04g0661900 29.5.11.20 protein.degradation.ubiquitin.proteasom... 0.02 Gene family
Solyc01g008370.3.1 Solyc01g008370.3 29.5.11.20 protein.degradation.ubiquitin.proteasom... 0.04 Gene family
Zm00001d001966 GRMZM2G061745 29.5.11.20 protein.degradation.ubiquitin.proteasom... 0.09 Gene family
Zm00001d026517 GRMZM2G368908,... 29.5.11.20 protein.degradation.ubiquitin.proteasom... 0.09 Gene family

Type GO Term Name Evidence Source
CC GO:0000502 proteasome complex IDA Arabidopsis.org
MF GO:0003674 molecular_function ND Arabidopsis.org
CC GO:0005737 cytoplasm ISM Arabidopsis.org
CC GO:0005829 cytosol IDA Arabidopsis.org
BP GO:0006511 ubiquitin-dependent protein catabolic process TAS Arabidopsis.org
CC GO:0008541 proteasome regulatory particle, lid subcomplex ISS Arabidopsis.org
BP GO:0009965 leaf morphogenesis IMP Arabidopsis.org
BP GO:0042023 DNA endoreduplication RCA Arabidopsis.org
BP GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process RCA Arabidopsis.org
BP GO:0043248 proteasome assembly RCA Arabidopsis.org
BP GO:0051510 regulation of unidimensional cell growth RCA Arabidopsis.org
BP GO:0051788 response to misfolded protein RCA Arabidopsis.org
BP GO:0080129 proteasome core complex assembly RCA Arabidopsis.org
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR000555 JAMM/MPN+_dom 14 124
IPR024969 Rpn11/EIF3F_C 174 285
No external refs found!