AT5G05280


Description : RING/U-box superfamily protein


Gene families : OG_01_0000002 (Gene family) Phylogenetic Tree(s): OG0000002_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): AT5G05280
Cluster HCCA cluster: Cluster_118

Target Alias Description ECC score Gene Family Method Actions
AT1G04360 No alias RING/U-box superfamily protein 0.03 Gene family
AT1G22500 No alias RING/U-box superfamily protein 0.02 Gene family
AT1G35330 No alias RING/U-box superfamily protein 0.03 Gene family
AT2G34000 No alias RING/U-box superfamily protein 0.02 Gene family
AT2G42360 No alias RING/U-box superfamily protein 0.04 Gene family
AT2G47560 No alias RING/U-box superfamily protein 0.03 Gene family
AT3G18773 No alias RING/U-box superfamily protein 0.02 Gene family
AT3G62690 ATL5 AtL5 0.03 Gene family
AT4G38140 No alias RING/U-box superfamily protein 0.02 Gene family
AT5G42200 No alias RING/U-box superfamily protein 0.03 Gene family
Cpa|evm.model.tig00000792.59 No alias No description available 0.01 Gene family
GSVIVT01008754001 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.03 Gene family
GSVIVT01009096001 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.03 Gene family
GSVIVT01009098001 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.03 Gene family
GSVIVT01015682001 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.04 Gene family
GSVIVT01019530001 No alias 35.2 not assigned.unknown RING/U-box superfamily protein 0.03 Gene family
GSVIVT01027769001 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.03 Gene family
GSVIVT01028038001 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.01 Gene family
GSVIVT01028306001 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.04 Gene family
GSVIVT01032684001 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.05 Gene family
LOC_Os01g61470 Os01g0830900 No description available 0.02 Gene family
LOC_Os02g33720 Os02g0541500 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.01 Gene family
LOC_Os02g35329 Os02g0559800 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.01 Gene family
LOC_Os02g36300 Os02g0572200 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.01 Gene family
LOC_Os02g36330 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
LOC_Os02g43120 Os02g0645000 No description available 0.02 Gene family
LOC_Os02g57460 Os02g0820200 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.01 Gene family
LOC_Os03g44636 Os03g0648600 No description available 0.03 Gene family
LOC_Os04g49550 Os04g0585000 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
LOC_Os05g11860 No alias No description available 0.04 Gene family
LOC_Os05g39260 Os05g0468900 No description available 0.03 Gene family
LOC_Os06g11450 Os06g0218300 No description available 0.02 Gene family
LOC_Os06g16060 Os06g0271600 No description available 0.03 Gene family
LOC_Os06g34530 Os06g0536100 No description available 0.04 Gene family
LOC_Os06g34560 Os06g0536466,... No description available 0.03 Gene family
LOC_Os06g34610 Os06g0537100 No description available 0.02 Gene family
LOC_Os08g44950 Os08g0563500 No description available 0.04 Gene family
LOC_Os09g37050 Os09g0542600 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
MA_10244600g0010 No alias No description available 0.02 Gene family
MA_10260361g0010 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
MA_10426834g0010 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.03 Gene family
MA_10429624g0010 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
MA_10436028g0020 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.04 Gene family
MA_1115518g0010 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.03 Gene family
MA_1143g0010 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
MA_126287g0010 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.03 Gene family
MA_17390g0010 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.03 Gene family
MA_181940g0010 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
MA_222729g0010 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.04 Gene family
MA_289646g0010 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.01 Gene family
MA_3380g0010 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.01 Gene family
MA_41514g0010 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.03 Gene family
MA_42543g0010 No alias No description available 0.02 Gene family
MA_69343g0010 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.03 Gene family
MA_77628g0010 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
MA_786911g0010 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
MA_80729g0030 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
MA_96368g0010 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
Solyc01g081040.3.1 Solyc01g081040.3 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.03 Gene family
Solyc01g098725.1.1 Solyc01g098725.1 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING E3... 0.02 Gene family
Solyc02g083400.3.1 Solyc02g083400.3 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.03 Gene family
Solyc03g123680.1.1 Solyc03g123680.1 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
Solyc04g014220.1.1 Solyc04g014220.1 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.04 Gene family
Solyc04g082690.1.1 Solyc04g082690.1 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING ATL8 0.03 Gene family
Solyc05g005790.3.1 Solyc05g005790.3 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.01 Gene family
Solyc07g053420.3.1 Solyc07g053420.3 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
Solyc08g076830.1.1 Solyc08g076830.1 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.03 Gene family
Solyc09g075320.1.1 Solyc09g075320.1 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.01 Gene family
Solyc10g081780.2.1 Solyc10g081780.2 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.04 Gene family
Solyc11g005290.2.1 Solyc11g005290.2 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.03 Gene family
Solyc11g005320.1.1 Solyc11g005320.1 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.05 Gene family
Solyc11g010330.2.1 Solyc11g010330.2 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
Solyc12g009065.1.1 Solyc12g009065.1 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
Solyc12g094690.1.1 Solyc12g094690.1 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING ATL8 0.03 Gene family
Zm00001d002535 GRMZM2G146847 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.03 Gene family
Zm00001d003497 GRMZM2G171277 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
Zm00001d007609 GRMZM2G041549 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
Zm00001d013110 GRMZM2G028188 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
Zm00001d016104 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
Zm00001d016142 GRMZM2G324111 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.03 Gene family
Zm00001d016721 GRMZM2G451308 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.01 Gene family
Zm00001d017645 GRMZM2G057789 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING ATL8 0.02 Gene family
Zm00001d017678 GRMZM2G004480 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.05 Gene family
Zm00001d018122 GRMZM2G323013 No description available 0.02 Gene family
Zm00001d029996 GRMZM2G042538 No description available 0.04 Gene family
Zm00001d031880 No alias No description available 0.03 Gene family
Zm00001d034369 GRMZM2G135011 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
Zm00001d037300 GRMZM2G324375 No description available 0.03 Gene family
Zm00001d037533 GRMZM2G021796 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.01 Gene family
Zm00001d045051 GRMZM2G478553 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.05 Gene family
Zm00001d051833 GRMZM5G885045 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.09 Gene family
Zm00001d051894 GRMZM2G146228 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.04 Gene family
Zm00001d052268 GRMZM2G080079 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family

Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IDA Arabidopsis.org
MF GO:0008270 zinc ion binding ISS Arabidopsis.org
BP GO:0009555 pollen development IMP Arabidopsis.org
BP GO:0009901 anther dehiscence IMP Arabidopsis.org
BP GO:0016567 protein ubiquitination IDA Arabidopsis.org
BP GO:0048443 stamen development IMP Arabidopsis.org
BP GO:0080141 regulation of jasmonic acid biosynthetic process IMP Arabidopsis.org
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001841 Znf_RING 112 155
No external refs found!