AT5G04895


Description : DEA(D/H)-box RNA helicase family protein


Gene families : OG_01_0000624 (Gene family) Phylogenetic Tree(s): OG0000624_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): AT5G04895
Cluster HCCA cluster: Cluster_28

Target Alias Description ECC score Gene Family Method Actions
AT1G48650 No alias DEA(D/H)-box RNA helicase family protein 0.03 Gene family
Cpa|evm.model.tig00000786.1 No alias 28.99 DNA.unspecified DEA(D/H)-box RNA helicase family protein 0.02 Gene family
Cre12.g492450 No alias 28.1 DNA.synthesis/chromatin structure RNA helicase... 0.02 Gene family
GSVIVT01008365001 No alias 28.99 DNA.unspecified DEA(D/H)-box RNA helicase family protein 0.03 Gene family
GSVIVT01023271001 No alias 28.1 DNA.synthesis/chromatin structure RNA helicase... 0.03 Gene family
MA_10437209g0010 No alias 28.1 DNA.synthesis/chromatin structure DEA(D/H)-box RNA... 0.02 Gene family
MA_177779g0010 No alias 28.1 DNA.synthesis/chromatin structure RNA helicase... 0.01 Gene family
Smo177444 PACid_15404071 28.1 DNA.synthesis/chromatin structure RNA helicase... 0.03 Gene family
Solyc01g006710.3.1 Solyc01g006710.3 28.1 DNA.synthesis/chromatin structure DEA(D/H)-box RNA... 0.03 Gene family
Zm00001d032735 GRMZM2G399212 28.1 DNA.synthesis/chromatin structure RNA helicase... 0.03 Gene family
Zm00001d034013 GRMZM5G802858 28.1 DNA.synthesis/chromatin structure DEA(D/H)-box RNA... 0.04 Gene family

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding ISS Arabidopsis.org
MF GO:0004386 helicase activity ISS Arabidopsis.org
MF GO:0005524 ATP binding ISS Arabidopsis.org
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR011709 DUF1605 878 959
IPR014720 dsRBD_dom 1060 1122
IPR007502 Helicase-assoc_dom 723 795
IPR011545 DEAD/DEAH_box_helicase_dom 268 421
IPR001650 Helicase_C 528 657
No external refs found!