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  5. Nbi_g29481

Nbi_g29481


Description : not classified & original description: none


Gene families : OG0001180 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001180_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g29481

Target Alias Description ECC score Gene Family Method Actions
Aop_g01923 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene18277.t1 Aspi01Gene18277 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Gb_27093 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os01g41220.1 LOC_Os01g41220 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os05g29920.1 LOC_Os05g29920 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os12g09620.1 LOC_Os12g09620 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_131122g0020 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Pir_g05401 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g13405 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g24191 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g32816 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e018374_P001 Zm00001e018374 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e021276_P001 Zm00001e021276 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
CC GO:0005789 endoplasmic reticulum membrane IEP HCCA
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
MF GO:0030247 polysaccharide binding IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
InterPro domains Description Start Stop
IPR007493 DUF538 91 196
No external refs found!