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  5. Nbi_g29475

Nbi_g29475


Description : not classified & original description: none


Gene families : OG0000828 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000828_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g29475
Cluster HCCA: Cluster_225

Target Alias Description ECC score Gene Family Method Actions
Ala_g30961 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g32652 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0071.g036826 No alias not classified & original description: CDS=1-366 0.03 OrthoFinder output from all 47 species
Dcu_g15517 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g11962 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01028935001 No alias No description available 0.01 OrthoFinder output from all 47 species
Gb_21780 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Gb_37137 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Len_g08302 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Len_g58273 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_82524g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mp1g18220.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Ore_g06011 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g26411 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ore_g31689 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g39477 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0005576 extracellular region IEP HCCA
CC GO:0005618 cell wall IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP HCCA
CC GO:0030312
external encapsulating structure
 IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
CC GO:0048046 apoplast IEP HCCA
InterPro domains Description Start Stop
IPR009489 PAR1 139 292
No external refs found!