Nbi_g29303 (MED34, ATRECQ2, RECQL2)

Aliases : MED34, ATRECQ2, RECQL2

Description : component *(MED34) of MEDIATOR transcription co-activator complex & original description: none

Gene families : OG0000844 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000844_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Nbi_g29303
Cluster	HCCA: Cluster_65

Target	Alias	Description	ECC score	Gene Family Method
Als_g15902	RECQI1	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Aspi01Gene10169.t1	ATRECQ4A,...	helicase component *(RecQ4A) of RTR Holliday junction...	0.04	OrthoFinder output from all 47 species
Aspi01Gene36086.t1	RecQl3, ATRECQ3,...	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Cba_g37588	RecQl3, ATRECQ3	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ceric.30G003800.1	RecQl3, ATRECQ3,...	not classified & original description: pacid=50608389...	0.03	OrthoFinder output from all 47 species
Ehy_g13229	ATRECQ4A, ATSGS1, RECQ4A	helicase component *(RecQ4A) of RTR Holliday junction...	0.03	OrthoFinder output from all 47 species
Ehy_g14607	RECQI1	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Sam_g25246	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003678	DNA helicase activity	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004386	helicase activity	None	Extended
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006259	DNA metabolic process	None	Extended
BP	GO:0006260	DNA replication	IEA	Interproscan
BP	GO:0006281	DNA repair	IEA	Interproscan
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0006950	response to stress	None	Extended
BP	GO:0006974	cellular response to DNA damage stimulus	None	Extended
MF	GO:0008094	ATP-dependent activity, acting on DNA	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0033554	cellular response to stress	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
MF	GO:0043138	3'-5' DNA helicase activity	IEA	Interproscan
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051716	cellular response to stimulus	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
MF	GO:0140097	catalytic activity, acting on DNA	None	Extended
MF	GO:0140640	catalytic activity, acting on a nucleic acid	None	Extended
MF	GO:0140657	ATP-dependent activity	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0016887	ATP hydrolysis activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR032284	RecQ_Zn-bd	424	479
IPR001650	Helicase_C	306	411
IPR011545	DEAD/DEAH_box_helicase_dom	97	263
IPR018982	RQC_domain	486	597

External Links

No external refs found!

Nbi_g29303 (MED34, ATRECQ2, RECQL2)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation