AT5G02450


Description : Ribosomal protein L36e family protein


Gene families : OG_01_0001837 (Gene family) Phylogenetic Tree(s): OG0001837_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): AT5G02450
Cluster HCCA cluster: Cluster_211

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00021493.69 No alias 29.2.1.2.2.36 protein.synthesis.ribosomal... 0.32 Gene family
Cre12.g484050 No alias 29.2.1.2.2.36 protein.synthesis.ribosomal... 0.4 Gene family
GSVIVT01026914001 No alias 29.2.1.2.2.36 protein.synthesis.ribosomal... 0.31 Gene family
GSVIVT01028917001 No alias 29.2.1.2.2.36 protein.synthesis.ribosomal... 0.27 Gene family
LOC_Os01g62350 Os01g0840700 29.2.1.2.2.36 protein.synthesis.ribosomal... 0.21 Gene family
LOC_Os05g38520 Os05g0459900 29.2.1.2.2.36 protein.synthesis.ribosomal... 0.33 Gene family
MA_10430792g0010 No alias 29.2.1.2.2.36 protein.synthesis.ribosomal... 0.15 Gene family
MA_24782g0010 No alias 29.2.1.2.2.36 protein.synthesis.ribosomal... 0.12 Gene family
MA_69756g0010 No alias 29.2.1.2.2.36 protein.synthesis.ribosomal... 0.03 Gene family
Smo267958 PACid_15415134 No description available 0.14 Gene family
Smo439710 PACid_15403850 No description available 0.17 Gene family
Solyc01g094560.3.1 Solyc01g094560.3 29.2.1.2.2.36 protein.synthesis.ribosomal... 0.13 Gene family
Solyc03g025520.3.1 Solyc03g025520.3 29.2.1.2.2.36 protein.synthesis.ribosomal... 0.12 Gene family
Solyc06g036050.3.1 Solyc06g036050.3 29.2.1.2.2.36 protein.synthesis.ribosomal... 0.23 Gene family
Zm00001d010528 GRMZM2G009936 29.2.1.2.2.36 protein.synthesis.ribosomal... 0.25 Gene family
Zm00001d038374 GRMZM5G850966 29.2.1.2.2.36 protein.synthesis.ribosomal... 0.29 Gene family

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome ISS Arabidopsis.org
CC GO:0005737 cytoplasm ISM Arabidopsis.org
CC GO:0005774 vacuolar membrane IDA Arabidopsis.org
CC GO:0005840 ribosome ISS Arabidopsis.org
BP GO:0006412 translation ISS Arabidopsis.org
CC GO:0009506 plasmodesma IDA Arabidopsis.org
CC GO:0022625 cytosolic large ribosomal subunit IDA Arabidopsis.org
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR000509 Ribosomal_L36e 4 97
No external refs found!