MA_95662g0020


Description : U-box domain-containing protein 27 OS=Arabidopsis thaliana (sp|q9flf4|pub27_arath : 110.0)


Gene families : OG_01_0000112 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000112_tree ,
OG_02_0000097 (LandPlants) Phylogenetic Tree(s): OG_02_0000097_tree ,
OG_03_0004101 (SeedPlants) Phylogenetic Tree(s): OG_03_0004101_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_95662g0020
Cluster HCCA: Cluster_242

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00030p00130440 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
AT2G35930 PUB23 plant U-box 23 0.03 Archaeplastida
AT3G11840 PUB24 plant U-box 24 0.03 Archaeplastida
GSVIVT01011140001 No alias E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis thaliana 0.02 Archaeplastida
GSVIVT01011616001 No alias U-box domain-containing protein 20 OS=Arabidopsis thaliana 0.02 Archaeplastida
Gb_02628 No alias U-box domain-containing protein 21 OS=Arabidopsis... 0.04 Archaeplastida
Gb_02633 No alias U-box domain-containing protein 21 OS=Arabidopsis... 0.02 Archaeplastida
LOC_Os04g34140.1 No alias E3 ubiquitin ligase (PUB) 0.06 Archaeplastida
LOC_Os08g04470.1 No alias U-box domain-containing protein 8 OS=Arabidopsis... 0.04 Archaeplastida
LOC_Os10g03440.1 No alias U-box domain-containing protein 20 OS=Arabidopsis... 0.05 Archaeplastida
MA_10425865g0010 No alias U-box domain-containing protein 25 OS=Arabidopsis... 0.09 Archaeplastida
MA_7928010g0010 No alias E3 ubiquitin-protein ligase PUB22 OS=Arabidopsis... 0.09 Archaeplastida
MA_84154g0010 No alias U-box domain-containing protein 25 OS=Arabidopsis... 0.03 Archaeplastida
Mp3g22750.1 No alias U-box domain-containing protein 26 OS=Arabidopsis... 0.02 Archaeplastida
Solyc01g007010.2.1 No alias E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis... 0.02 Archaeplastida
Solyc01g007020.4.1 No alias E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis... 0.02 Archaeplastida
Solyc01g007040.4.1 No alias E3 ubiquitin-protein ligase PUB22 OS=Arabidopsis... 0.02 Archaeplastida
Solyc01g007050.3.1 No alias E3 ubiquitin-protein ligase PUB24 OS=Arabidopsis... 0.02 Archaeplastida
Solyc01g080920.3.1 No alias No annotation 0.02 Archaeplastida
Solyc01g107980.3.1 No alias U-box domain-containing protein 25 OS=Arabidopsis... 0.03 Archaeplastida
Solyc11g006030.1.1 No alias U-box domain-containing protein 21 OS=Arabidopsis... 0.02 Archaeplastida
Zm00001e000999_P001 No alias U-box domain-containing protein 20 OS=Arabidopsis... 0.05 Archaeplastida
Zm00001e002598_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e007109_P001 No alias E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis... 0.03 Archaeplastida
Zm00001e008167_P001 No alias E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis... 0.02 Archaeplastida
Zm00001e015763_P001 No alias U-box domain-containing protein 21 OS=Arabidopsis... 0.03 Archaeplastida
Zm00001e036030_P001 No alias U-box domain-containing protein 21 OS=Arabidopsis... 0.03 Archaeplastida
Zm00001e039417_P001 No alias E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis... 0.03 Archaeplastida
AMTR_s00030p00130440 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.03 LandPlants
AMTR_s00138p00053700 evm_27.TU.AmTr_v1... U-box domain-containing protein 21 OS=Arabidopsis thaliana 0.02 LandPlants
AT2G35930 PUB23 plant U-box 23 0.03 LandPlants
AT3G11840 PUB24 plant U-box 24 0.02 LandPlants
AT3G19380 PUB25 plant U-box 25 0.03 LandPlants
GSVIVT01011140001 No alias E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis thaliana 0.02 LandPlants
GSVIVT01011616001 No alias U-box domain-containing protein 20 OS=Arabidopsis thaliana 0.02 LandPlants
Gb_02628 No alias U-box domain-containing protein 21 OS=Arabidopsis... 0.03 LandPlants
Gb_02633 No alias U-box domain-containing protein 21 OS=Arabidopsis... 0.02 LandPlants
Gb_29938 No alias E3 ubiquitin ligase (PUB) 0.03 LandPlants
LOC_Os04g34140.1 No alias E3 ubiquitin ligase (PUB) 0.06 LandPlants
LOC_Os10g03440.1 No alias U-box domain-containing protein 20 OS=Arabidopsis... 0.05 LandPlants
MA_7928010g0010 No alias E3 ubiquitin-protein ligase PUB22 OS=Arabidopsis... 0.09 LandPlants
MA_84154g0010 No alias U-box domain-containing protein 25 OS=Arabidopsis... 0.02 LandPlants
Pp3c4_6500V3.1 No alias plant U-box 22 0.01 LandPlants
Solyc01g007010.2.1 No alias E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis... 0.02 LandPlants
Solyc01g007020.4.1 No alias E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis... 0.02 LandPlants
Solyc01g007040.4.1 No alias E3 ubiquitin-protein ligase PUB22 OS=Arabidopsis... 0.02 LandPlants
Solyc01g107980.3.1 No alias U-box domain-containing protein 25 OS=Arabidopsis... 0.03 LandPlants
Solyc11g005700.1.1 No alias E3 ubiquitin ligase (PUB) 0.03 LandPlants
Solyc11g006030.1.1 No alias U-box domain-containing protein 21 OS=Arabidopsis... 0.02 LandPlants
Zm00001e000999_P001 No alias U-box domain-containing protein 20 OS=Arabidopsis... 0.02 LandPlants
Zm00001e002598_P001 No alias no hits & (original description: none) 0.03 LandPlants
Zm00001e007109_P001 No alias E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis... 0.03 LandPlants
Zm00001e015763_P001 No alias U-box domain-containing protein 21 OS=Arabidopsis... 0.02 LandPlants
Zm00001e039417_P001 No alias E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis... 0.02 LandPlants
Zm00001e040854_P001 No alias U-box domain-containing protein 29 OS=Arabidopsis... 0.02 LandPlants
Zm00001e041397_P001 No alias E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis... 0.02 LandPlants
AMTR_s00030p00130440 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.04 SeedPlants
AT5G64660 CMPG2, ATCMPG2 CYS, MET, PRO, and GLY protein 2 0.02 SeedPlants
Gb_29938 No alias E3 ubiquitin ligase (PUB) 0.02 SeedPlants
LOC_Os04g34140.1 No alias E3 ubiquitin ligase (PUB) 0.04 SeedPlants
Solyc04g071030.1.1 No alias E3 ubiquitin ligase (PUB) 0.03 SeedPlants
Zm00001e022679_P001 No alias U-box domain-containing protein 29 OS=Arabidopsis... 0.01 SeedPlants

Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEA Interproscan
BP GO:0016567 protein ubiquitination IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR003613 Ubox_domain 12 82
No external refs found!