AT1G23420 (INO)


Aliases : INO

Description : Plant-specific transcription factor YABBY family protein


Gene families : OG_01_0000890 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000890_tree ,
OG_02_0002078 (LandPlants) Phylogenetic Tree(s): OG_02_0002078_tree ,
OG_03_0001123 (SeedPlants) Phylogenetic Tree(s): OG_03_0001123_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G23420
Cluster HCCA: Cluster_32

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00047p00199030 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2C2... 0.07 Archaeplastida
AMTR_s00078p00029420 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2C2... 0.02 Archaeplastida
AMTR_s00085p00032940 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2C2... 0.07 Archaeplastida
AT2G45190 AFO, YAB1, FIL Plant-specific transcription factor YABBY family protein 0.06 Archaeplastida
AT4G00180 YAB3 Plant-specific transcription factor YABBY family protein 0.03 Archaeplastida
GSVIVT01012246001 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.1 Archaeplastida
GSVIVT01015567001 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.05 Archaeplastida
GSVIVT01022586001 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.03 Archaeplastida
GSVIVT01027648001 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.03 Archaeplastida
GSVIVT01037533001 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.04 Archaeplastida
Gb_22423 No alias transcription factor (YABBY) 0.05 Archaeplastida
LOC_Os02g42950.1 No alias transcription factor (YABBY) 0.04 Archaeplastida
LOC_Os04g45330.1 No alias transcription factor (YABBY) 0.04 Archaeplastida
LOC_Os10g36420.1 No alias transcription factor (YABBY) 0.05 Archaeplastida
LOC_Os12g42610.1 No alias transcription factor (YABBY) 0.04 Archaeplastida
MA_10432332g0010 No alias transcription factor (YABBY) 0.05 Archaeplastida
Solyc01g010240.3.1 No alias transcription factor (YABBY) 0.1 Archaeplastida
Solyc01g091010.3.1 No alias transcription factor (YABBY) 0.06 Archaeplastida
Solyc05g005240.2.1 No alias transcription factor (YABBY) 0.05 Archaeplastida
Solyc06g073920.3.1 No alias transcription factor (YABBY) 0.05 Archaeplastida
Solyc08g079100.3.1 No alias transcription factor (YABBY) 0.04 Archaeplastida
Solyc11g071810.2.1 No alias transcription factor (YABBY) 0.04 Archaeplastida
Zm00001e000845_P005 No alias transcription factor (YABBY) 0.04 Archaeplastida
Zm00001e003268_P003 No alias transcription factor (YABBY) 0.05 Archaeplastida
Zm00001e004396_P001 No alias transcription factor (YABBY) 0.05 Archaeplastida
Zm00001e007412_P003 No alias transcription factor (YABBY) 0.03 Archaeplastida
Zm00001e012387_P001 No alias transcription factor (YABBY) 0.05 Archaeplastida
Zm00001e012388_P001 No alias transcription factor (YABBY) 0.04 Archaeplastida
Zm00001e012577_P001 No alias transcription factor (YABBY) 0.04 Archaeplastida
Zm00001e017951_P002 No alias transcription factor (YABBY) 0.04 Archaeplastida
Zm00001e032845_P002 No alias transcription factor (YABBY) 0.05 Archaeplastida
Zm00001e038717_P002 No alias transcription factor (YABBY) 0.04 Archaeplastida
Zm00001e041322_P001 No alias transcription factor (YABBY) 0.05 Archaeplastida
AMTR_s00004p00165390 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2C2... 0.01 LandPlants
AMTR_s00078p00029420 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2C2... 0.02 LandPlants
GSVIVT01015567001 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.04 LandPlants
GSVIVT01022586001 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.02 LandPlants
MA_10432332g0010 No alias transcription factor (YABBY) 0.04 LandPlants
Solyc05g005240.2.1 No alias transcription factor (YABBY) 0.04 LandPlants
Solyc06g073920.3.1 No alias transcription factor (YABBY) 0.03 LandPlants
Zm00001e003268_P003 No alias transcription factor (YABBY) 0.03 LandPlants
Zm00001e032845_P002 No alias transcription factor (YABBY) 0.04 LandPlants
Zm00001e035310_P003 No alias transcription factor (YABBY) 0.01 LandPlants
AMTR_s00004p00165390 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2C2... 0.01 SeedPlants
GSVIVT01015567001 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.04 SeedPlants
GSVIVT01022586001 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.02 SeedPlants
LOC_Os03g44710.2 No alias transcription factor (YABBY) 0.01 SeedPlants
LOC_Os07g06620.2 No alias transcription factor (YABBY) 0.02 SeedPlants
MA_10432332g0010 No alias transcription factor (YABBY) 0.03 SeedPlants
Solyc05g005240.2.1 No alias transcription factor (YABBY) 0.02 SeedPlants
Solyc06g073920.3.1 No alias transcription factor (YABBY) 0.02 SeedPlants
Zm00001e003268_P003 No alias transcription factor (YABBY) 0.02 SeedPlants
Zm00001e017951_P002 No alias transcription factor (YABBY) 0.02 SeedPlants
Zm00001e032845_P002 No alias transcription factor (YABBY) 0.02 SeedPlants
Zm00001e035310_P003 No alias transcription factor (YABBY) 0.01 SeedPlants

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity ISS Interproscan
MF GO:0005515 protein binding IPI Interproscan
CC GO:0005634 nucleus IDA Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0006333 chromatin assembly or disassembly RCA Interproscan
BP GO:0009944 polarity specification of adaxial/abaxial axis IDA Interproscan
BP GO:0048481 plant ovule development IMP Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR006780 YABBY 18 181
No external refs found!