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  5. Nbi_g29158

Nbi_g29158


Description : regulatory protein of RNA homeostasis & original description: none


Gene families : OG0000297 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000297_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g29158
Cluster HCCA: Cluster_162

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00074p00109750 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C3H zinc... 0.02 OrthoFinder output from all 47 species
Dde_g04320 No alias regulatory protein of RNA homeostasis & original... 0.03 OrthoFinder output from all 47 species
Gb_32584 ZFN1 C3H zinc finger transcription factor 0.03 OrthoFinder output from all 47 species
Gb_37448 No alias C3H zinc finger transcription factor 0.03 OrthoFinder output from all 47 species
Len_g17303 No alias regulatory protein of RNA homeostasis & original... 0.03 OrthoFinder output from all 47 species
Pir_g02233 No alias regulatory protein of RNA homeostasis & original... 0.03 OrthoFinder output from all 47 species
Pnu_g17909 No alias regulatory protein of RNA homeostasis & original... 0.03 OrthoFinder output from all 47 species
Sam_g15873 No alias regulatory protein of RNA homeostasis & original... 0.02 OrthoFinder output from all 47 species
Sam_g37296 No alias regulatory protein of RNA homeostasis & original... 0.02 OrthoFinder output from all 47 species
Smo45667 ZFN1 RNA biosynthesis.transcriptional activation.C3H zinc... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046872 metal ion binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000571 Znf_CCCH 301 325
IPR000571 Znf_CCCH 256 280
IPR000571 Znf_CCCH 132 157
IPR000571 Znf_CCCH 86 110
IPR000571 Znf_CCCH 48 62
No external refs found!