AT4G40060 (ATHB16, HB16, ATHB-16)


Aliases : ATHB16, HB16, ATHB-16

Description : homeobox protein 16


Gene families : OG_01_0000092 (Gene family) Phylogenetic Tree(s): OG0000092_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): AT4G40060
Cluster HCCA cluster: Cluster_141

Target Alias Description ECC score Gene Family Method Actions
AT5G65310 ATHB5, ATHB-5, HB5 homeobox protein 5 0.03 Gene family
GSVIVT01008065001 No alias 27.3.22 RNA.regulation of transcription.HB,Homeobox... 0.02 Gene family
GSVIVT01038619001 No alias No description available 0.06 Gene family
LOC_Os02g49700 Os02g0729700 27.3.22 RNA.regulation of transcription.HB,Homeobox... 0.01 Gene family
LOC_Os10g23090 Os10g0377300 27.3.22 RNA.regulation of transcription.HB,Homeobox... 0.02 Gene family
LOC_Os10g26500 Os10g0404900 27.3.22 RNA.regulation of transcription.HB,Homeobox... 0.02 Gene family
MA_169305g0010 No alias No description available 0.02 Gene family
MA_3981761g0010 No alias 27.3.22 RNA.regulation of transcription.HB,Homeobox... 0.02 Gene family
Solyc01g096320.3.1 Solyc01g096320.3 No description available 0.08 Gene family
Solyc04g005800.3.1 Solyc04g005800.3 No description available 0.05 Gene family
Zm00001d005951 GRMZM2G041127 27.3.22 RNA.regulation of transcription.HB,Homeobox... 0.1 Gene family
Zm00001d017422 GRMZM2G117164 27.3.22 RNA.regulation of transcription.HB,Homeobox... 0.02 Gene family
Zm00001d027852 GRMZM2G139963 27.3.22 RNA.regulation of transcription.HB,Homeobox... 0.03 Gene family
Zm00001d033005 GRMZM2G097349 27.3.22 RNA.regulation of transcription.HB,Homeobox... 0.02 Gene family
Zm00001d048312 GRMZM2G178741 27.3.22 RNA.regulation of transcription.HB,Homeobox... 0.03 Gene family

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity ISS Arabidopsis.org
MF GO:0003700 DNA-binding transcription factor activity NAS Arabidopsis.org
CC GO:0005634 nucleus ISS Arabidopsis.org
CC GO:0005634 nucleus ISM Arabidopsis.org
BP GO:0006355 regulation of transcription, DNA-templated ISS Arabidopsis.org
BP GO:0009637 response to blue light IMP Arabidopsis.org
BP GO:0030308 negative regulation of cell growth IMP Arabidopsis.org
MF GO:0043565 sequence-specific DNA binding IDA Arabidopsis.org
BP GO:0045893 positive regulation of transcription, DNA-templated IDA Arabidopsis.org
BP GO:0048510 regulation of timing of transition from vegetative to reproductive phase IMP Arabidopsis.org
BP GO:0048573 photoperiodism, flowering IMP Arabidopsis.org
BP GO:0048573 photoperiodism, flowering RCA Arabidopsis.org
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001356 Homeobox_dom 59 112
IPR003106 Leu_zip_homeo 114 155
No external refs found!