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  5. MA_9542585g0010

MA_9542585g0010


Description : Pentatricopeptide repeat-containing protein At5g55840 OS=Arabidopsis thaliana (sp|q9lvq5|pp432_arath : 378.0)


Gene families : OG_01_0001630 (Archaeplastida) Phylogenetic Tree(s): OG_01_0001630_tree ,
OG_02_0001046 (LandPlants) Phylogenetic Tree(s): OG_02_0001046_tree ,
OG_03_0000527 (SeedPlants) Phylogenetic Tree(s): OG_03_0000527_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_9542585g0010
Cluster HCCA: Cluster_163

Target Alias Description ECC score Gene Family Method Actions
MA_10433091g0010 No alias Pentatricopeptide repeat-containing protein At1g62930,... 0.05 Archaeplastida
MA_175359g0010 No alias Putative pentatricopeptide repeat-containing protein... 0.06 Archaeplastida
MA_47344g0010 No alias Pentatricopeptide repeat-containing protein At5g39710... 0.05 Archaeplastida
MA_78481g0010 No alias Pentatricopeptide repeat-containing protein At1g63130,... 0.07 Archaeplastida
MA_914400g0010 No alias Pentatricopeptide repeat-containing protein At5g55840... 0.05 Archaeplastida
MA_959553g0010 No alias Pentatricopeptide repeat-containing protein At1g62910... 0.05 Archaeplastida
MA_10433091g0010 No alias Pentatricopeptide repeat-containing protein At1g62930,... 0.04 LandPlants
MA_175359g0010 No alias Putative pentatricopeptide repeat-containing protein... 0.06 LandPlants
MA_47344g0010 No alias Pentatricopeptide repeat-containing protein At5g39710... 0.05 LandPlants
MA_78481g0010 No alias Pentatricopeptide repeat-containing protein At1g63130,... 0.06 LandPlants
MA_914400g0010 No alias Pentatricopeptide repeat-containing protein At5g55840... 0.05 LandPlants
MA_959553g0010 No alias Pentatricopeptide repeat-containing protein At1g62910... 0.05 LandPlants
MA_47344g0010 No alias Pentatricopeptide repeat-containing protein At5g39710... 0.05 SeedPlants
MA_78481g0010 No alias Pentatricopeptide repeat-containing protein At1g63130,... 0.06 SeedPlants
MA_959553g0010 No alias Pentatricopeptide repeat-containing protein At1g62910... 0.05 SeedPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 133 164
IPR002885 Pentatricopeptide_repeat 584 615
IPR002885 Pentatricopeptide_repeat 341 369
IPR002885 Pentatricopeptide_repeat 167 198
IPR002885 Pentatricopeptide_repeat 271 320
IPR002885 Pentatricopeptide_repeat 622 670
IPR002885 Pentatricopeptide_repeat 376 425
IPR002885 Pentatricopeptide_repeat 516 565
IPR002885 Pentatricopeptide_repeat 205 254
IPR002885 Pentatricopeptide_repeat 447 495
No external refs found!