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  5. Nbi_g28807

Nbi_g28807


Description : EC_3.2 glycosylase & original description: none


Gene families : OG0000353 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000353_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g28807
Cluster HCCA: Cluster_140

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00019p00207760 evm_27.TU.AmTr_v1... Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase 0.04 OrthoFinder output from all 47 species
AMTR_s00019p00208020 ATBFRUCT1,... Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase 0.04 OrthoFinder output from all 47 species
AMTR_s00064p00137280 ATBFRUCT1,... Carbohydrate metabolism.sucrose... 0.02 OrthoFinder output from all 47 species
AT2G36190 AtcwINV4, cwINV4 cell wall invertase 4 0.07 OrthoFinder output from all 47 species
AT3G13790 ATBFRUCT1, ATCWINV1 Glycosyl hydrolases family 32 protein 0.02 OrthoFinder output from all 47 species
Adi_g055002 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g127065 ATBFRUCT1, ATCWINV1 EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g07793 ATFRUCT5,... EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g24750 No alias EC_3.2 glycosylase & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g32907 No alias EC_3.2 glycosylase & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g13339 ATBFRUCT1, ATCWINV1 EC_3.2 glycosylase & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g70150 No alias EC_3.2 glycosylase & original description: none 0.21 OrthoFinder output from all 47 species
Aspi01Gene66492.t2 Aspi01Gene66492 EC_3.2 glycosylase & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0551.g076592 No alias EC_3.2 glycosylase & original description: CDS=27-2609 0.04 OrthoFinder output from all 47 species
Ceric.11G075800.1 Ceric.11G075800 EC_3.2 glycosylase & original description:... 0.14 OrthoFinder output from all 47 species
Ceric.20G018500.1 Ceric.20G018500 EC_3.2 glycosylase & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.33G065700.1 Ceric.33G065700 EC_3.2 glycosylase & original description:... 0.12 OrthoFinder output from all 47 species
Cre12.g488050 AtcwINV4, cwINV4 Enzyme classification.EC_3 hydrolases.EC_3.2... 0.01 OrthoFinder output from all 47 species
Dcu_g45877 ATFRUCT5,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g23231 ATFRUCT5,... EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g20517 No alias EC_3.2 glycosylase & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g32296 ATBFRUCT1, ATCWINV1 EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01016869001 ATBFRUCT1, ATCWINV1 Carbohydrate metabolism.sucrose... 0.04 OrthoFinder output from all 47 species
GSVIVT01035389001 ATBFRUCT1, ATCWINV1 Beta-fructofuranosidase, insoluble isoenzyme CWINV1... 0.03 OrthoFinder output from all 47 species
Gb_29201 ATBFRUCT1, ATCWINV1 acid beta-fructofuranosidase (CWIN) 0.03 OrthoFinder output from all 47 species
Gb_41695 No alias acid beta-fructofuranosidase (CWIN). acid... 0.03 OrthoFinder output from all 47 species
LOC_Os04g33720.1 AtcwINV2,... acid beta-fructofuranosidase (CWIN) 0.04 OrthoFinder output from all 47 species
LOC_Os04g33740.1 AtcwINV2,... acid beta-fructofuranosidase (CWIN) 0.05 OrthoFinder output from all 47 species
LOC_Os04g56930.1 ATFRUCT5,... Beta-fructofuranosidase, insoluble isoenzyme 5 OS=Oryza... 0.02 OrthoFinder output from all 47 species
Len_g28396 No alias EC_3.2 glycosylase & original description: none 0.04 OrthoFinder output from all 47 species
Len_g57911 No alias EC_3.2 glycosylase & original description: none 0.09 OrthoFinder output from all 47 species
MA_10380652g0010 AtcwINV4, cwINV4 Enzyme classification.EC_3 hydrolases.EC_3.2... 0.01 OrthoFinder output from all 47 species
MA_10426147g0010 ATBFRUCT1, ATCWINV1 acid beta-fructofuranosidase (CWIN) 0.02 OrthoFinder output from all 47 species
MA_10430642g0020 No alias Beta-fructofuranosidase 1 OS=Zea mays... 0.02 OrthoFinder output from all 47 species
MA_160937g0010 ATBFRUCT1, ATCWINV1 Beta-fructofuranosidase, insoluble isoenzyme CWINV1... 0.02 OrthoFinder output from all 47 species
MA_166367g0020 ATBFRUCT1, ATCWINV1 acid beta-fructofuranosidase (CWIN). acid... 0.03 OrthoFinder output from all 47 species
MA_58418g0010 ATBFRUCT1, ATCWINV1 acid beta-fructofuranosidase (CWIN). acid... 0.02 OrthoFinder output from all 47 species
MA_64408g0010 ATBFRUCT1, ATCWINV1 Enzyme classification.EC_3 hydrolases.EC_3.2... 0.02 OrthoFinder output from all 47 species
MA_883162g0010 ATBFRUCT1, ATCWINV1 acid beta-fructofuranosidase (CWIN) 0.02 OrthoFinder output from all 47 species
Mp7g02630.1 No alias Acid beta-fructofuranosidase 2, vacuolar OS=Rosa hybrid... 0.01 OrthoFinder output from all 47 species
Ore_g08500 No alias EC_3.2 glycosylase & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g23083 No alias EC_3.2 glycosylase & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g26108 ATBFRUCT1, ATCWINV1 EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Pp3c24_1570V3.1 Pp3c24_1570 Glycosyl hydrolases family 32 protein 0.01 OrthoFinder output from all 47 species
Pp3c9_23640V3.1 Pp3c9_23640 Glycosyl hydrolases family 32 protein 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0017.g007335 No alias EC_3.2 glycosylase & original description: CDS=239-1966 0.03 OrthoFinder output from all 47 species
Sam_g04231 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo98949 ATBETAFRUCT4, VAC-INV Carbohydrate metabolism.sucrose... 0.03 OrthoFinder output from all 47 species
Solyc03g083910.5.1 Solyc03g083910 acid beta-fructofuranosidase (VIN) 0.03 OrthoFinder output from all 47 species
Solyc03g121680.3.1 ATBFRUCT1,... acid beta-fructofuranosidase (CWIN) 0.03 OrthoFinder output from all 47 species
Solyc09g010080.3.1 AtcwINV4,... acid beta-fructofuranosidase (CWIN) 0.03 OrthoFinder output from all 47 species
Solyc10g083290.4.1 AtcwINV2,... acid beta-fructofuranosidase (CWIN) 0.04 OrthoFinder output from all 47 species
Solyc10g083300.2.1 AtcwINV2,... acid beta-fructofuranosidase (CWIN) 0.04 OrthoFinder output from all 47 species
Spa_g30244 ATBFRUCT1, ATCWINV1 EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g06593 ATBFRUCT1, ATCWINV1 EC_3.2 glycosylase & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e006638_P001 ATFRUCT5,... acid beta-fructofuranosidase (CWIN) 0.04 OrthoFinder output from all 47 species
Zm00001e008192_P003 AtcwINV2,... acid beta-fructofuranosidase (CWIN) 0.03 OrthoFinder output from all 47 species
Zm00001e014731_P001 AtcwINV2,... acid beta-fructofuranosidase (CWIN) 0.03 OrthoFinder output from all 47 species
Zm00001e018530_P006 ATFRUCT5,... acid beta-fructofuranosidase (CWIN) 0.02 OrthoFinder output from all 47 species
Zm00001e040835_P002 ATBFRUCT1,... acid beta-fructofuranosidase (CWIN) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0004843 cysteine-type deubiquitinase activity IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005507 copper ion binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016759 cellulose synthase activity IEP HCCA
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP HCCA
MF GO:0019783 ubiquitin-like protein peptidase activity IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
BP GO:0030243 cellulose metabolic process IEP HCCA
BP GO:0030244 cellulose biosynthetic process IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
MF GO:0101005 deubiquitinase activity IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
MF GO:0140359 ABC-type transporter activity IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
InterPro domains Description Start Stop
IPR013189 Glyco_hydro_32_C 321 443
IPR013148 Glyco_hydro_32_N 1 318
No external refs found!