AT4G36740 (ATHB40, HB40, HB-5)


Aliases : ATHB40, HB40, HB-5

Description : homeobox protein 40


Gene families : OG_01_0000092 (Gene family) Phylogenetic Tree(s): OG0000092_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): AT4G36740
Cluster HCCA cluster: Cluster_275

Target Alias Description ECC score Gene Family Method Actions
AT2G36610 ATHB22, HB22 homeobox protein 22 0.03 Gene family
AT2G46680 HB-7, ATHB-7, ATHB7 homeobox 7 0.04 Gene family
AT3G61890 HB-12, ATHB-12, ATHB12 homeobox 12 0.03 Gene family
AT5G03790 HB51, ATHB51, LMI1 homeobox 51 0.03 Gene family
AT5G53980 ATHB52, HB52 homeobox protein 52 0.03 Gene family
AT5G66700 ATHB53, HB53, HB-8 homeobox 53 0.03 Gene family
GSVIVT01009083001 No alias No description available 0.06 Gene family
GSVIVT01027407001 No alias 27.3.22 RNA.regulation of transcription.HB,Homeobox... 0.03 Gene family
GSVIVT01038619001 No alias No description available 0.05 Gene family
LOC_Os03g07450 Os03g0170600 27.3.22 RNA.regulation of transcription.HB,Homeobox... 0.03 Gene family
LOC_Os03g08960 Os03g0188900 27.3.22 RNA.regulation of transcription.HB,Homeobox... 0.02 Gene family
LOC_Os09g21180 Os09g0379600 27.3.22 RNA.regulation of transcription.HB,Homeobox... 0.02 Gene family
LOC_Os09g29460 Os09g0470500 27.3.22 RNA.regulation of transcription.HB,Homeobox... 0.02 Gene family
LOC_Os10g26500 Os10g0404900 27.3.22 RNA.regulation of transcription.HB,Homeobox... 0.02 Gene family
MA_3688g0010 No alias No description available 0.02 Gene family
Smo18217 PACid_15421310 27.3.22 RNA.regulation of transcription.HB,Homeobox... 0.03 Gene family
Solyc02g085630.3.1 Solyc02g085630.3 No description available 0.02 Gene family
Solyc02g087840.3.1 Solyc02g087840.3 No description available 0.03 Gene family
Solyc03g082550.3.1 Solyc03g082550.3 27.3.22 RNA.regulation of transcription.HB,Homeobox... 0.05 Gene family
Solyc06g053220.3.1 Solyc06g053220.3 No description available 0.04 Gene family
Solyc09g008810.3.1 Solyc09g008810.3 No description available 0.04 Gene family
Solyc11g010270.2.1 Solyc11g010270.2 No description available 0.02 Gene family
Zm00001d002799 GRMZM2G351330 27.3.22 RNA.regulation of transcription.HB,Homeobox... 0.02 Gene family
Zm00001d005951 GRMZM2G041127 27.3.22 RNA.regulation of transcription.HB,Homeobox... 0.02 Gene family
Zm00001d017422 GRMZM2G117164 27.3.22 RNA.regulation of transcription.HB,Homeobox... 0.03 Gene family
Zm00001d017920 No alias 27.3.22 RNA.regulation of transcription.HB,Homeobox... 0.07 Gene family
Zm00001d027852 GRMZM2G139963 27.3.22 RNA.regulation of transcription.HB,Homeobox... 0.02 Gene family
Zm00001d027991 GRMZM2G132367 27.3.22 RNA.regulation of transcription.HB,Homeobox... 0.02 Gene family
Zm00001d033005 GRMZM2G097349 27.3.22 RNA.regulation of transcription.HB,Homeobox... 0.03 Gene family
Zm00001d048312 GRMZM2G178741 27.3.22 RNA.regulation of transcription.HB,Homeobox... 0.02 Gene family

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding ISS Arabidopsis.org
MF GO:0003700 DNA-binding transcription factor activity ISS Arabidopsis.org
CC GO:0005634 nucleus ISS Arabidopsis.org
CC GO:0005634 nucleus ISM Arabidopsis.org
BP GO:0006355 regulation of transcription, DNA-templated ISS Arabidopsis.org
BP GO:0009733 response to auxin IEP Arabidopsis.org
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001356 Homeobox_dom 57 109
No external refs found!