AT4G36630 (EMB2754)


Aliases : EMB2754

Description : Vacuolar sorting protein 39


Gene families : OG_01_0005528 (Gene family) Phylogenetic Tree(s): OG0005528_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): AT4G36630
Cluster HCCA cluster: Cluster_205

Target Alias Description ECC score Gene Family Method Actions
Cre06.g278124 No alias No description available 0.03 Gene family
GSVIVT01018960001 No alias 35.2 not assigned.unknown EMBRYO DEFECTIVE 2754 (EMB2754) 0.03 Gene family
Solyc07g056660.3.1 Solyc07g056660.3 35.2 not assigned.unknown EMBRYO DEFECTIVE 2754 (EMB2754) 0.04 Gene family
Zm00001d033776 GRMZM2G176735 35.2 not assigned.unknown EMBRYO DEFECTIVE 2754 (EMB2754) 0.07 Gene family

Type GO Term Name Evidence Source
BP GO:0006486 protein glycosylation RCA Arabidopsis.org
BP GO:0006487 protein N-linked glycosylation RCA Arabidopsis.org
BP GO:0006623 protein targeting to vacuole RCA Arabidopsis.org
BP GO:0007033 vacuole organization RCA Arabidopsis.org
CC GO:0009506 plasmodesma IDA Arabidopsis.org
BP GO:0009793 embryo development ending in seed dormancy NAS Arabidopsis.org
BP GO:0042732 D-xylose metabolic process RCA Arabidopsis.org
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR019453 VPS39/TGF_beta_rcpt-assoc_2 875 983
IPR000547 Clathrin_H-chain/VPS_repeat 632 762
IPR019452 VPS39/TGF_beta_rcpt-assoc_1 502 612
IPR001180 CNH_dom 72 277
No external refs found!