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Nbi_g28749 (emb1138)


Aliases : emb1138

Description : group-II intron splicing RNA helicase *(RH3) & original description: none


Gene families : OG0000466 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000466_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g28749

Target Alias Description ECC score Gene Family Method Actions
AT3G22330 PMH2, ATRH53 putative mitochondrial RNA helicase 2 0.03 OrthoFinder output from all 47 species
Adi_g055950 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g03195 emb1138 group-II intron splicing RNA helicase *(RH3) & original... 0.03 OrthoFinder output from all 47 species
Als_g05682 emb1138 group-II intron splicing RNA helicase *(RH3) & original... 0.02 OrthoFinder output from all 47 species
Aob_g09620 PRH75 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s2641.g112487 emb1138 not classified & original description: CDS=202-2694 0.05 OrthoFinder output from all 47 species
Cba_g18561 PRH75 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g21286 emb1138 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g38604 PRH75 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g10755 PRH75 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g13082 emb1138 group-II intron splicing RNA helicase *(RH3) & original... 0.04 OrthoFinder output from all 47 species
Msp_g22012 emb1138 sRNA cargo-loading helicase *(RH11/37) of extracellular... 0.05 OrthoFinder output from all 47 species
Nbi_g03129 PRH75 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g06711 No alias group-II intron splicing RNA helicase *(RH3) & original... 0.02 OrthoFinder output from all 47 species
Solyc12g006320.3.1 PMH2, ATRH53,... RNA helicase (PMH) 0.03 OrthoFinder output from all 47 species
Spa_g25942 PRH75 not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
InterPro domains Description Start Stop
IPR012562 GUCT 672 767
IPR001878 Znf_CCHC 909 925
IPR011545 DEAD/DEAH_box_helicase_dom 268 439
IPR001650 Helicase_C 479 585
No external refs found!