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  5. Cre05.g233800

Cre05.g233800


Description : 29.1.14 protein.aa activation.glycine-tRNA ligase glycyl-tRNA synthetase / glycine--tRNA ligase


Gene families : OG_01_0001778 (Gene family) Phylogenetic Tree(s): OG0001778_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Cre05.g233800
Cluster HCCA cluster: Cluster_35

Target Alias Description ECC score Gene Family Method Actions
AT1G29880 No alias glycyl-tRNA synthetase / glycine--tRNA ligase 0.05 Gene family
LOC_Os08g42560 Os08g0538000 29.1.14 protein.aa activation.glycine-tRNA ligase... 0.03 Gene family
Solyc11g039830.2.1 Solyc11g039830.2 29.1.14 protein.aa activation.glycine-tRNA ligase... 0.04 Gene family
Zm00001d031674 GRMZM2G041797 29.1.14 protein.aa activation.glycine-tRNA ligase... 0.03 Gene family
Zm00001d052689 GRMZM5G821551 29.1.14 protein.aa activation.glycine-tRNA ligase... 0.07 Gene family

Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEA InterProScan
MF GO:0004812 aminoacyl-tRNA ligase activity IEA InterProScan
MF GO:0005524 ATP binding IEA InterProScan
BP GO:0006418 tRNA aminoacylation for protein translation IEA InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR004154 Anticodon-bd 575 667
IPR000738 WHEP-TRS_dom 14 65
IPR002314 aa-tRNA-synt_IIb 253 550
No external refs found!