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  5. Nbi_g28707

Nbi_g28707 (MSL4)


Aliases : MSL4

Description : mechanosensitive ion channel *(MSL) & original description: none


Gene families : OG0000689 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000689_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g28707

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00024p00217410 MSL10, ATMSL10,... Solute transport.channels.MSL mechanosensitive ion channel 0.02 OrthoFinder output from all 47 species
Aev_g29476 MSL5 mechanosensitive ion channel *(MSL) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene20698.t1 MSL5, Aspi01Gene20698 mechanosensitive ion channel *(MSL) & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os02g44770.1 MSL5, LOC_Os02g44770 mechanosensitive ion channel (MSL) 0.01 OrthoFinder output from all 47 species
Ppi_g55542 MSL5 mechanosensitive ion channel *(MSL) & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0017.g007089 MSL4 mechanosensitive ion channel *(MSL) & original... 0.03 OrthoFinder output from all 47 species
Zm00001e007259_P002 Zm00001e007259 mechanosensitive ion channel (MSL) 0.02 OrthoFinder output from all 47 species
Zm00001e041490_P001 Zm00001e041490 mechanosensitive ion channel (MSL) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004620 phospholipase activity IEP HCCA
MF GO:0008081 phosphoric diester hydrolase activity IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
MF GO:0016298 lipase activity IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
MF GO:0050290 sphingomyelin phosphodiesterase D activity IEP HCCA
MF GO:0051213 dioxygenase activity IEP HCCA
MF GO:0140359 ABC-type transporter activity IEP HCCA
InterPro domains Description Start Stop
IPR006685 MscS_channel 746 948
No external refs found!