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  5. Nbi_g28689

Nbi_g28689 (BGAL3)


Aliases : BGAL3

Description : EC_3.2 glycosylase & original description: none


Gene families : OG0000377 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000377_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g28689
Cluster HCCA: Cluster_23

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01006709001 BGAL8 Cell wall.pectin.rhamnogalacturonan I.modification and... 0.03 OrthoFinder output from all 47 species
LOC_Os01g65460.1 BGAL10, LOC_Os01g65460 1,2-beta-galactosidase. beta-galactosidase (BGAL) 0.03 OrthoFinder output from all 47 species
LOC_Os10g18400.1 BGAL15, LOC_Os10g18400 beta-galactosidase (BGAL) 0.07 OrthoFinder output from all 47 species
LOC_Os12g24170.1 BGAL9, LOC_Os12g24170 beta-galactosidase (BGAL) 0.06 OrthoFinder output from all 47 species
Msp_g40402 BGAL1 EC_3.2 glycosylase & original description: none 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0030246 carbohydrate binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000922 Lectin_gal-bd_dom 775 852
IPR031330 Gly_Hdrlase_35_cat 44 347
IPR041392 GHD 360 427
No external refs found!