Nbi_g28567 (RPL10C, SAG24)


Aliases : RPL10C, SAG24

Description : component *(uL16) of large ribosomal-subunit (LSU) proteome & original description: none


Gene families : OG0013752 (OrthoFinder output from all 39 species) Phylogenetic Tree(s): OG0013752_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g28567
Cluster HCCA: Cluster_244

Target Alias Description ECC score Gene Family Method Actions
Aev_g24303 RPL10C, SAG24 component *(uL16) of large ribosomal-subunit (LSU)... 0.37 OrthoFinder output from all 39 species
Ala_g12308 RPL10C, SAG24 component *(uL16) of large ribosomal-subunit (LSU)... 0.22 OrthoFinder output from all 39 species
Als_g24842 RPL10C, SAG24 component *(uL16) of large ribosomal-subunit (LSU)... 0.44 OrthoFinder output from all 39 species
Aob_g20849 RPL10C, SAG24 component *(uL16) of large ribosomal-subunit (LSU)... 0.48 OrthoFinder output from all 39 species
Cba_g46548 RPL10C, SAG24 component *(uL16) of large ribosomal-subunit (LSU)... 0.07 OrthoFinder output from all 39 species
Dcu_g12882 RPL10C, SAG24 component *(uL16) of large ribosomal-subunit (LSU)... 0.08 OrthoFinder output from all 39 species
Dde_g20184 RPL10C, SAG24 component *(uL16) of large ribosomal-subunit (LSU)... 0.15 OrthoFinder output from all 39 species
Msp_g20490 RPL10C, SAG24 component *(uL16) of large ribosomal-subunit (LSU)... 0.27 OrthoFinder output from all 39 species
Tin_g22817 RPL10C, SAG24 not classified & original description: none 0.02 OrthoFinder output from all 39 species
Tin_g25096 RPL10C, SAG24 component *(uL16) of large ribosomal-subunit (LSU)... 0.24 OrthoFinder output from all 39 species
Tin_g31664 RPL10C, SAG24 component *(uL16) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 39 species

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0044183 protein folding chaperone IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:0140662 ATP-dependent protein folding chaperone IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR016180 Ribosomal_L10e/L16 13 166
No external refs found!