AT4G34830 (MRL1)


Aliases : MRL1

Description : Pentatricopeptide repeat (PPR) superfamily protein


Gene families : OG_01_0004827 (Gene family) Phylogenetic Tree(s): OG0004827_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): AT4G34830
Cluster HCCA cluster: Cluster_192

Target Alias Description ECC score Gene Family Method Actions
Cre06.g298300 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.02 Gene family
GSVIVT01024119001 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.09 Gene family
LOC_Os10g10170 Os10g0181200 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.07 Gene family
MA_10429571g0010 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.05 Gene family
MA_122602g0010 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.07 Gene family
Smo115078 PACid_15419154 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.06 Gene family
Smo169254 PACid_15423533 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.04 Gene family
Solyc01g111020.3.1 Solyc01g111020.3 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.12 Gene family
Zm00001d030398 GRMZM2G018929,... 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.07 Gene family

Type GO Term Name Evidence Source
CC GO:0009507 chloroplast IDA Arabidopsis.org
CC GO:0009507 chloroplast ISM Arabidopsis.org
BP GO:0009902 chloroplast relocation RCA Arabidopsis.org
BP GO:0010027 thylakoid membrane organization RCA Arabidopsis.org
BP GO:0010103 stomatal complex morphogenesis RCA Arabidopsis.org
BP GO:0016556 mRNA modification RCA Arabidopsis.org
BP GO:0019288 isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway RCA Arabidopsis.org
BP GO:0034660 ncRNA metabolic process RCA Arabidopsis.org
BP GO:0042793 plastid transcription RCA Arabidopsis.org
BP GO:0048255 mRNA stabilization IMP Arabidopsis.org
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 566 599
IPR002885 Pentatricopeptide_repeat 468 497
IPR002885 Pentatricopeptide_repeat 504 549
IPR033443 PPR_long 616 776
No external refs found!