AT4G34160 (CYCD3, CYCD3;1)


Aliases : CYCD3, CYCD3;1

Description : CYCLIN D3;1


Gene families : OG_01_0000097 (Gene family) Phylogenetic Tree(s): OG0000097_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): AT4G34160
Cluster HCCA cluster: Cluster_15

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01000226001 No alias 31.3 cell.cycle Encode CYCD33, a CYCD3 D-type cyclin. ... 0.05 Gene family
MA_10436212g0010 No alias 31.3 cell.cycle Encodes a D-type cyclin CYCD41 that... 0.02 Gene family
Smo15078 PACid_15411299 No description available 0.03 Gene family
Smo412774 PACid_15414013 No description available 0.04 Gene family
Solyc04g078470.3.1 Solyc04g078470.3 31.2 cell.division encodes a cyclin D-type protein... 0.03 Gene family
Solyc05g006050.3.1 Solyc05g006050.3 31.3 cell.cycle Encodes a D-type cyclin that physically... 0.04 Gene family
Solyc07g054950.2.1 Solyc07g054950.2 31.3 cell.cycle Cyclin D61 (CYCD61) 0.04 Gene family
Zm00001d005293 GRMZM2G161382 31.2 cell.division encodes a cyclin D-type protein... 0.04 Gene family
Zm00001d019696 GRMZM2G107377 No description available 0.05 Gene family
Zm00001d020772 GRMZM2G140633 31.3 cell.cycle Encodes a cyclin involved in cell... 0.07 Gene family
Zm00001d030894 GRMZM2G329655 No description available 0.02 Gene family
Zm00001d050475 No alias 31.3 cell.cycle encodes a D-type cyclin whose... 0.02 Gene family

Type GO Term Name Evidence Source
BP GO:0000082 G1/S transition of mitotic cell cycle IMP Arabidopsis.org
BP GO:0000280 nuclear division RCA Arabidopsis.org
BP GO:0000911 cytokinesis by cell plate formation RCA Arabidopsis.org
MF GO:0005515 protein binding IPI Arabidopsis.org
CC GO:0005634 nucleus IDA Arabidopsis.org
CC GO:0005634 nucleus ISM Arabidopsis.org
BP GO:0006275 regulation of DNA replication RCA Arabidopsis.org
BP GO:0009735 response to cytokinin IMP Arabidopsis.org
BP GO:0009735 response to cytokinin IGI Arabidopsis.org
BP GO:0009741 response to brassinosteroid IGI Arabidopsis.org
BP GO:0009744 response to sucrose IEP Arabidopsis.org
BP GO:0010075 regulation of meristem growth RCA Arabidopsis.org
BP GO:0010103 stomatal complex morphogenesis RCA Arabidopsis.org
BP GO:0010389 regulation of G2/M transition of mitotic cell cycle RCA Arabidopsis.org
BP GO:0010583 response to cyclopentenone IEP Arabidopsis.org
BP GO:0010583 response to cyclopentenone RCA Arabidopsis.org
MF GO:0016538 cyclin-dependent protein serine/threonine kinase regulator activity ISS Arabidopsis.org
BP GO:0042023 DNA endoreduplication RCA Arabidopsis.org
BP GO:0042127 regulation of cell proliferation IGI Arabidopsis.org
BP GO:0042127 regulation of cell proliferation RCA Arabidopsis.org
BP GO:0048316 seed development IGI Arabidopsis.org
BP GO:0051225 spindle assembly RCA Arabidopsis.org
BP GO:0051726 regulation of cell cycle ISS Arabidopsis.org
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR006671 Cyclin_N 85 186
IPR004367 Cyclin_C-dom 189 285
No external refs found!